Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | CJZ71_RS12400 | Genome accession | NZ_CP022891 |
| Coordinates | 2304904..2305194 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain DKU_NT_03 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2299904..2310194
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJZ71_RS12360 (CJZ71_12360) | darA | 2299927..2300256 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| CJZ71_RS12365 (CJZ71_12365) | yaaR | 2300269..2300709 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| CJZ71_RS12370 (CJZ71_12370) | holB | 2300721..2301710 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| CJZ71_RS12375 (CJZ71_12375) | ricT | 2301713..2302540 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| CJZ71_RS12380 (CJZ71_12380) | yabA | 2302555..2302914 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| CJZ71_RS12385 (CJZ71_12385) | trmNF | 2302973..2303716 (+) | 744 | WP_041338388.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| CJZ71_RS12390 (CJZ71_12390) | yazA | 2303703..2304002 (+) | 300 | WP_069837179.1 | GIY-YIG nuclease family protein | - |
| CJZ71_RS12395 (CJZ71_12395) | rsmI | 2303977..2304855 (+) | 879 | WP_019712967.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| CJZ71_RS12400 (CJZ71_12400) | abrB | 2304904..2305194 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| CJZ71_RS12405 (CJZ71_12405) | metG | 2305689..2307683 (+) | 1995 | WP_014478594.1 | methionine--tRNA ligase | - |
| CJZ71_RS12410 (CJZ71_12410) | dayD | 2307763..2308530 (+) | 768 | WP_014478595.1 | TatD family hydrolase | - |
| CJZ71_RS12415 (CJZ71_12415) | yabE | 2308686..2309999 (+) | 1314 | WP_029726392.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=242644 CJZ71_RS12400 WP_003226760.1 2304904..2305194(-) (abrB) [Bacillus subtilis strain DKU_NT_03]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=242644 CJZ71_RS12400 WP_003226760.1 2304904..2305194(-) (abrB) [Bacillus subtilis strain DKU_NT_03]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |