Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   CJZ70_RS21650 Genome accession   NZ_CP022890
Coordinates   3454268..3454408 (-) Length   46 a.a.
NCBI ID   WP_225910706.1    Uniprot ID   -
Organism   Bacillus subtilis strain DKU_NT_02     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3449268..3459408
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJZ70_RS21645 - 3453150..3454322 (-) 1173 Protein_3593 condensation domain-containing protein -
  CJZ70_RS21650 comS 3454268..3454408 (-) 141 WP_225910706.1 competence protein ComS Regulator
  CJZ70_RS21655 srfAB 3454500..3457544 (-) 3045 Protein_3595 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5260.11 Da        Isoelectric Point: 8.7633

>NTDB_id=242598 CJZ70_RS21650 WP_225910706.1 3454268..3454408(-) (comS) [Bacillus subtilis strain DKU_NT_02]
MNRSGKHLISCIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=242598 CJZ70_RS21650 WP_225910706.1 3454268..3454408(-) (comS) [Bacillus subtilis strain DKU_NT_02]
TTGAACCGATCAGGCAAGCATCTTATCAGCTGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978

Multiple sequence alignment