Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | CJZ70_RS20005 | Genome accession | NZ_CP022890 |
| Coordinates | 3820254..3820544 (+) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain DKU_NT_02 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3815254..3825544
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJZ70_RS19990 (CJZ70_19990) | yabE | 3815449..3816762 (-) | 1314 | WP_015715099.1 | ubiquitin-like domain-containing protein | - |
| CJZ70_RS19995 (CJZ70_19995) | dayD | 3816918..3817685 (-) | 768 | WP_014478595.1 | TatD family hydrolase | - |
| CJZ70_RS20000 (CJZ70_20000) | metG | 3817765..3819759 (-) | 1995 | WP_014478594.1 | methionine--tRNA ligase | - |
| CJZ70_RS20005 (CJZ70_20005) | abrB | 3820254..3820544 (+) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| CJZ70_RS20010 (CJZ70_20010) | rsmI | 3820593..3821471 (-) | 879 | WP_019712967.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| CJZ70_RS20015 (CJZ70_20015) | yazA | 3821446..3821745 (-) | 300 | WP_069837179.1 | GIY-YIG nuclease family protein | - |
| CJZ70_RS20020 (CJZ70_20020) | trmNF | 3821732..3822475 (-) | 744 | WP_041338388.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| CJZ70_RS20025 (CJZ70_20025) | yabA | 3822534..3822893 (-) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| CJZ70_RS20030 (CJZ70_20030) | ricT | 3822908..3823735 (-) | 828 | WP_041338386.1 | competence/sporulation regulator complex protein RicT | - |
| CJZ70_RS20035 (CJZ70_20035) | holB | 3823738..3824727 (-) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| CJZ70_RS20040 (CJZ70_20040) | yaaR | 3824739..3825179 (-) | 441 | WP_009966249.1 | YaaR family protein | - |
| CJZ70_RS20045 (CJZ70_20045) | darA | 3825192..3825521 (-) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=242591 CJZ70_RS20005 WP_003226760.1 3820254..3820544(+) (abrB) [Bacillus subtilis strain DKU_NT_02]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=242591 CJZ70_RS20005 WP_003226760.1 3820254..3820544(+) (abrB) [Bacillus subtilis strain DKU_NT_02]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |