Detailed information    

insolico Bioinformatically predicted

Overview


Name   nin/comJ   Type   Regulator
Locus tag   CJZ70_RS18245 Genome accession   NZ_CP022890
Coordinates   3473156..3473554 (+) Length   132 a.a.
NCBI ID   WP_014478800.1    Uniprot ID   A0A0D1L5A4
Organism   Bacillus subtilis strain DKU_NT_02     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3468156..3478554
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJZ70_RS18220 (CJZ70_18220) hxlR 3468894..3469256 (-) 363 WP_003246265.1 transcriptional activator HxlR -
  CJZ70_RS18225 (CJZ70_18225) hxlA 3469485..3470117 (+) 633 WP_003234604.1 3-hexulose-6-phosphate synthase -
  CJZ70_RS18230 (CJZ70_18230) hxlB 3470123..3470680 (+) 558 WP_014478803.1 6-phospho-3-hexuloisomerase -
  CJZ70_RS18235 (CJZ70_18235) tlpC 3470791..3472512 (+) 1722 Protein_3600 methyl-accepting chemotaxis protein TlpC -
  CJZ70_RS18240 (CJZ70_18240) nucA/comI 3472680..3473129 (+) 450 WP_014475770.1 DNA-entry nuclease Machinery gene
  CJZ70_RS18245 (CJZ70_18245) nin/comJ 3473156..3473554 (+) 399 WP_014478800.1 DNA-entry nuclease inhibitor Regulator
  CJZ70_RS18250 (CJZ70_18250) bglC 3473591..3475024 (-) 1434 WP_014478799.1 6-phospho-beta-glucosidase -
  CJZ70_RS18255 (CJZ70_18255) - 3475097..3475841 (-) 745 Protein_3604 AAA family ATPase -
  CJZ70_RS18260 (CJZ70_18260) - 3475860..3476180 (-) 321 WP_014478796.1 DUF3147 family protein -
  CJZ70_RS18265 (CJZ70_18265) - 3476168..3476590 (-) 423 WP_014478795.1 MarR family transcriptional regulator -
  CJZ70_RS18270 (CJZ70_18270) yckD 3476718..3477050 (-) 333 WP_014478794.1 YckD family protein -
  CJZ70_RS18275 (CJZ70_18275) yckC 3477132..3477587 (-) 456 WP_014478793.1 RDD family protein -
  CJZ70_RS21275 - 3477607..3477804 (-) 198 WP_121509395.1 hypothetical protein -

Sequence


Protein


Download         Length: 132 a.a.        Molecular weight: 15006.98 Da        Isoelectric Point: 4.8991

>NTDB_id=242587 CJZ70_RS18245 WP_014478800.1 3473156..3473554(+) (nin/comJ) [Bacillus subtilis strain DKU_NT_02]
MIKSWKPQELSISYHQFTVFQKDSTPPIMDWTDEAIEKGYTAADGAISFEAQRNTKAFILLRLNSSETVNSYEKKVTVPF
HVTENGIHIESIMSKRLSFDLPKGDYQLTCWTVPAEMSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=242587 CJZ70_RS18245 WP_014478800.1 3473156..3473554(+) (nin/comJ) [Bacillus subtilis strain DKU_NT_02]
TTGATCAAATCATGGAAGCCGCAAGAACTTTCGATTTCATATCATCAATTTACTGTATTTCAAAAGGATTCTACACCTCC
TATAATGGATTGGACTGACGAAGCGATTGAAAAAGGATATACTGCGGCAGACGGAGCCATTTCATTTGAGGCACAGCGAA
ATACAAAGGCCTTTATTCTTTTGCGCCTGAACAGTTCAGAAACAGTAAACTCCTACGAAAAAAAAGTGACTGTTCCTTTT
CATGTCACAGAAAACGGAATTCATATTGAAAGCATTATGTCTAAGAGACTGTCCTTTGATCTGCCTAAAGGAGACTATCA
ATTGACATGCTGGACTGTGCCGGCTGAAATGTCAGATTTGCACGCCGACACTTATATTATTGATGCTGTTTCTGTGTAA

Domains


Predicted by InterproScan.

(9-129)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1L5A4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

97.727

100

0.977


Multiple sequence alignment