Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   CJZ70_RS15740 Genome accession   NZ_CP022890
Coordinates   2961627..2962421 (-) Length   264 a.a.
NCBI ID   WP_014479217.1    Uniprot ID   -
Organism   Bacillus subtilis strain DKU_NT_02     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2956627..2967421
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CJZ70_RS15705 (CJZ70_15705) spdL 2957027..2957359 (-) 333 WP_014479219.1 SdpC immunity protein SpdL -
  CJZ70_RS15710 (CJZ70_15710) yfhK 2957444..2957962 (-) 519 WP_014479218.1 SH3 domain-containing protein -
  CJZ70_RS15715 (CJZ70_15715) - 2958189..2959339 (+) 1151 WP_087614160.1 IS3 family transposase -
  CJZ70_RS15720 (CJZ70_15720) yfhJ 2959397..2959666 (-) 270 WP_003243789.1 YfhJ family protein -
  CJZ70_RS15725 (CJZ70_15725) sspK 2959791..2959943 (+) 153 WP_003223241.1 small, acid-soluble spore protein K -
  CJZ70_RS15730 (CJZ70_15730) yfhI 2959975..2961168 (-) 1194 WP_003243500.1 MFS transporter -
  CJZ70_RS15735 (CJZ70_15735) yfhH 2961311..2961625 (-) 315 WP_003244592.1 YfhH family protein -
  CJZ70_RS15740 (CJZ70_15740) recX 2961627..2962421 (-) 795 WP_014479217.1 recombination regulator RecX Regulator
  CJZ70_RS15745 (CJZ70_15745) yfhF 2962510..2963421 (+) 912 WP_014479216.1 TIGR01777 family oxidoreductase -
  CJZ70_RS15750 (CJZ70_15750) yfhE 2963476..2963586 (+) 111 WP_003223230.1 YfhE family protein -
  CJZ70_RS15755 (CJZ70_15755) yfhD 2963653..2963844 (+) 192 WP_003233561.1 YfhD family protein -
  CJZ70_RS15760 (CJZ70_15760) yfhC 2963883..2964467 (-) 585 WP_032723010.1 nitroreductase -
  CJZ70_RS15765 (CJZ70_15765) yfhB 2964555..2965436 (-) 882 WP_014479213.1 PhzF family phenazine biosynthesis isomerase -
  CJZ70_RS15770 (CJZ70_15770) sxzA 2965551..2966582 (-) 1032 WP_003233568.1 iron ABC transporter permease -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.21 Da        Isoelectric Point: 6.6686

>NTDB_id=242581 CJZ70_RS15740 WP_014479217.1 2961627..2962421(-) (recX) [Bacillus subtilis strain DKU_NT_02]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAIK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=242581 CJZ70_RS15740 WP_014479217.1 2961627..2962421(-) (recX) [Bacillus subtilis strain DKU_NT_02]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGTGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATTAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.242

100

0.992

Multiple sequence alignment