Detailed information NTG0242563

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: CJZ70_RS12285
• Genome accession: NZ_CP022890
• Coordinates: 2331600..2331878 (-)
• Length: 92 a.a.
• NCBI ID: WP_003244728.1
• Uniprot ID: A0A199WGU6
• Organism: Bacillus subtilis strain DKU_NT_02
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 2326600..2336878

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJZ70_RS12265 (CJZ70_12265)	ade	2326659..2328392 (-)	1734	WP_069837481.1	adenine deaminase	-
CJZ70_RS12270 (CJZ70_12270)	ktrC	2328547..2329212 (-)	666	WP_003222311.1	Ktr system potassium transporter KtrC	-
CJZ70_RS12275 (CJZ70_12275)	ykqA	2329275..2330108 (-)	834	WP_014479687.1	gamma-glutamylcyclotransferase	-
CJZ70_RS12280 (CJZ70_12280)	kinC	2330124..2331410 (-)	1287	WP_003232333.1	two-component sensor histidine kinase KinC	-
CJZ70_RS12285 (CJZ70_12285)	abrB	2331600..2331878 (-)	279	WP_003244728.1	transcriptional regulator AbhA	Regulator
CJZ70_RS12290 (CJZ70_12290)	mreBH	2332162..2333169 (+)	1008	WP_003245743.1	cell shape-determining protein MreBH	-
CJZ70_RS12295 (CJZ70_12295)	ykpC	2333270..2333404 (+)	135	WP_003238865.1	protein YkpC	-
CJZ70_RS12300 (CJZ70_12300)	ampS	2333513..2334745 (+)	1233	WP_003232341.1	aminopeptidase	-
CJZ70_RS12305 (CJZ70_12305)	panEB	2334779..2335690 (-)	912	WP_095010676.1	ketopantoate reductase family protein	-

Sequence

Protein

• Length: 92 a.a.
• Molecular weight: 10256.07 Da
• Isoelectric Point: 5.8808

>NTDB_id=242563 CJZ70_RS12285 WP_003244728.1 2331600..2331878(-) (abrB) [Bacillus subtilis strain DKU_NT_02]
MKSIGVVRKVDELGRIVMPIELRRALDIAIKDSIEFFVDGDKIILKKYKPHGVCLMTGEITSENKEYGNGKITLSPEGAQ
LLLEEIQAALKE

Nucleotide

• Length: 279 bp

>NTDB_id=242563 CJZ70_RS12285 WP_003244728.1 2331600..2331878(-) (abrB) [Bacillus subtilis strain DKU_NT_02]
ATGAAATCAATAGGTGTTGTGAGAAAAGTAGATGAATTAGGCCGCATTGTCATGCCGATTGAGTTGAGACGGGCATTGGA
TATTGCCATAAAAGACAGCATTGAGTTTTTTGTTGACGGAGATAAAATTATCTTGAAAAAGTACAAACCTCATGGCGTTT
GTTTAATGACTGGAGAAATCACTTCAGAAAATAAAGAATACGGCAACGGTAAAATTACGCTAAGCCCTGAGGGTGCACAG
CTGCTTCTCGAAGAAATTCAAGCCGCTTTAAAAGAATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: A0A199WGU6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	58.242	98.913	0.576