Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | C9E65_RS05880 | Genome accession | NZ_CP028614 |
| Coordinates | 1180699..1181214 (+) | Length | 171 a.a. |
| NCBI ID | WP_001130215.1 | Uniprot ID | B5Z2A2 |
| Organism | Escherichia coli strain 141 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1175699..1186214
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C9E65_RS05835 (C9E65_06155) | csrA | 1176516..1176701 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| C9E65_RS05865 (C9E65_06185) | yqaB | 1177929..1178495 (+) | 567 | WP_000273309.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| C9E65_RS05870 (C9E65_06190) | yqaA | 1178492..1178920 (+) | 429 | WP_001287450.1 | YqaA family protein | - |
| C9E65_RS05875 (C9E65_06195) | gshA | 1178993..1180549 (+) | 1557 | WP_000611788.1 | glutamate--cysteine ligase | - |
| C9E65_RS05880 (C9E65_06200) | luxS | 1180699..1181214 (+) | 516 | WP_001130215.1 | S-ribosylhomocysteine lyase | Regulator |
| C9E65_RS05885 (C9E65_06205) | emrB | 1181278..1182816 (-) | 1539 | WP_001295176.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| C9E65_RS05890 (C9E65_06210) | emrA | 1182833..1184005 (-) | 1173 | WP_001302673.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| C9E65_RS05895 (C9E65_06215) | emrR | 1184132..1184662 (-) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| C9E65_RS05900 (C9E65_06220) | ygaH | 1184753..1185088 (-) | 336 | WP_000119749.1 | L-valine transporter subunit YgaH | - |
| C9E65_RS05905 (C9E65_06225) | ygaZ | 1185078..1185815 (-) | 738 | WP_000445658.1 | L-valine exporter subunit YgaZ | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19444.24 Da Isoelectric Point: 5.0362
>NTDB_id=242563 C9E65_RS05880 WP_001130215.1 1180699..1181214(+) (luxS) [Escherichia coli strain 141]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADVWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADVWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPKEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=242563 C9E65_RS05880 WP_001130215.1 1180699..1181214(+) (luxS) [Escherichia coli strain 141]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGTCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATTCCGGAGCTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGTCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATTCCGGAGCTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGAAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
72.515 |
100 |
0.725 |