Detailed information NTG0242394

Bioinformatically predicted

Overview

• Name: abrB
• Type: Regulator
• Locus tag: CJO35_RS08200
• Genome accession: NZ_CP022874
• Coordinates: 1588107..1588394 (+)
• Length: 95 a.a.
• NCBI ID: WP_003181383.1
• Uniprot ID: A0A1Y0YNS3
• Organism: Bacillus sp. 1s-1
• Function: repression of comK; repression of rok (predicted from homology) Competence regulation

Genomic Context

Location: 1583107..1593394

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJO35_RS08180 (CJO35_08185)	-	1584753..1585127 (+)	375	WP_003181373.1	nuclear transport factor 2 family protein	-
CJO35_RS08185 (CJO35_08190)	-	1585265..1586497 (-)	1233	WP_003181374.1	aminopeptidase	-
CJO35_RS08190 (CJO35_08195)	-	1586588..1586719 (-)	132	WP_003181378.1	protein YkpC	-
CJO35_RS08195 (CJO35_08200)	mreBH	1586793..1587800 (-)	1008	WP_003181381.1	rod-share determining protein MreBH	-
CJO35_RS08200 (CJO35_08205)	abrB	1588107..1588394 (+)	288	WP_003181383.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
CJO35_RS08205 (CJO35_08210)	-	1588562..1589899 (+)	1338	WP_003181386.1	ATP-binding protein	-
CJO35_RS08210 (CJO35_08215)	-	1589964..1590626 (+)	663	WP_003181388.1	TrkA family potassium uptake protein	-
CJO35_RS08215 (CJO35_08220)	ade	1590754..1592475 (+)	1722	WP_003181389.1	adenine deaminase	-

Sequence

Protein

• Length: 95 a.a.
• Molecular weight: 10554.41 Da
• Isoelectric Point: 6.9823

>NTDB_id=242394 CJO35_RS08200 WP_003181383.1 1588107..1588394(+) (abrB) [Bacillus sp. 1s-1]
MKAIGVVRKVDELGRIVMPIELRRALDISIKDSIEFFVDQDKIVLKKYKPHGVCLMTGEITSENREYGNGKITLSPEGAE
LLLEEIKAALNGVKA

Nucleotide

• Length: 288 bp

>NTDB_id=242394 CJO35_RS08200 WP_003181383.1 1588107..1588394(+) (abrB) [Bacillus sp. 1s-1]
TTGAAAGCAATAGGAGTTGTGAGAAAAGTAGACGAACTCGGCAGGATCGTGATGCCGATTGAATTGAGAAGAGCTTTGGA
TATCTCGATCAAGGACAGCATCGAATTCTTTGTCGACCAAGATAAAATCGTCCTGAAAAAATATAAACCGCACGGTGTGT
GTCTGATGACCGGTGAAATCACTTCTGAAAACCGCGAGTATGGAAACGGGAAAATTACGCTCAGTCCTGAAGGGGCCGAA
TTGCTTTTGGAAGAAATCAAAGCTGCCTTAAACGGAGTGAAAGCATAA

Domains

Predicted by InterproScan.

• AbrB C-terminal domain (AbrB_C) (53-88)

• Antidote-toxin recognition MazE, bacterial antitoxin (MazE_antitoxin) (8-51)

3D structure

• AlphaFold DB: A0A1Y0YNS3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
abrB	Bacillus subtilis subsp. subtilis str. 168	54.255	98.947	0.537