Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | LPL_RS13515 | Genome accession | NC_006369 |
| Coordinates | 3050907..3051500 (+) | Length | 197 a.a. |
| NCBI ID | WP_011216607.1 | Uniprot ID | Q5WT52 |
| Organism | Legionella pneumophila str. Lens | ||
| Function | promote later steps in plasmid transformation (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 3045907..3056500
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPL_RS13505 (lpl2671) | dnaX | 3048856..3050526 (+) | 1671 | WP_011216605.1 | DNA polymerase III subunit gamma/tau | - |
| LPL_RS13510 (lpl2672) | - | 3050560..3050898 (+) | 339 | WP_011216606.1 | YbaB/EbfC family nucleoid-associated protein | - |
| LPL_RS13515 (lpl2673) | recR | 3050907..3051500 (+) | 594 | WP_011216607.1 | recombination mediator RecR | Machinery gene |
| LPL_RS13520 (lpl2674) | - | 3051493..3052353 (+) | 861 | WP_011216608.1 | DUF547 domain-containing protein | - |
| LPL_RS13525 (lpl2675) | - | 3052350..3054347 (+) | 1998 | WP_011216609.1 | sulfatase-like hydrolase/transferase | - |
| LPL_RS13530 (lpl2676) | - | 3054572..3056050 (-) | 1479 | WP_011216610.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 21705.01 Da Isoelectric Point: 6.6782
>NTDB_id=24238 LPL_RS13515 WP_011216607.1 3050907..3051500(+) (recR) [Legionella pneumophila str. Lens]
MDALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNNYTEQTLCTLCQNPNRDSTLLC
VVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLPKLKELIIREKIQEVILALSPSVESQTTIHFIHQLLKDE
TVNISQLAHGIPSGGELEFLDGNTISSALKNRAVINV
MDALSRLVEALRCLPGVGPKSAQRMVFHLLQHQRQRGLHLASCLEQAMKHISHCQQCNNYTEQTLCTLCQNPNRDSTLLC
VVESPADVSAIEQSNSFQGKYFVLMGKISPLDGLGPDDIGLPKLKELIIREKIQEVILALSPSVESQTTIHFIHQLLKDE
TVNISQLAHGIPSGGELEFLDGNTISSALKNRAVINV
Nucleotide
Download Length: 594 bp
>NTDB_id=24238 LPL_RS13515 WP_011216607.1 3050907..3051500(+) (recR) [Legionella pneumophila str. Lens]
ATGGATGCTCTAAGCCGCTTGGTAGAGGCGCTTCGCTGTCTTCCTGGTGTGGGACCAAAATCAGCACAAAGAATGGTGTT
CCATTTATTGCAGCACCAAAGACAGCGAGGGTTACACCTTGCCTCCTGTTTGGAACAGGCAATGAAGCACATTAGTCATT
GCCAGCAGTGTAATAATTACACCGAACAAACTCTGTGTACTCTTTGCCAAAACCCCAATCGAGATTCAACATTACTTTGC
GTGGTAGAGAGTCCAGCGGATGTTTCTGCCATAGAACAAAGCAATTCCTTTCAAGGTAAATATTTTGTCCTTATGGGAAA
AATTTCTCCTCTTGATGGCTTGGGACCTGATGACATAGGTCTACCGAAACTTAAGGAGTTAATTATTAGGGAAAAAATTC
AGGAAGTTATTCTTGCATTAAGCCCCAGTGTTGAAAGCCAGACCACAATTCATTTTATTCATCAGTTGCTAAAGGATGAA
ACCGTCAATATCAGTCAGTTAGCACATGGAATACCATCAGGTGGTGAATTAGAATTTTTAGATGGGAATACTATAAGCAG
TGCCCTTAAGAACAGAGCTGTGATTAATGTCTAA
ATGGATGCTCTAAGCCGCTTGGTAGAGGCGCTTCGCTGTCTTCCTGGTGTGGGACCAAAATCAGCACAAAGAATGGTGTT
CCATTTATTGCAGCACCAAAGACAGCGAGGGTTACACCTTGCCTCCTGTTTGGAACAGGCAATGAAGCACATTAGTCATT
GCCAGCAGTGTAATAATTACACCGAACAAACTCTGTGTACTCTTTGCCAAAACCCCAATCGAGATTCAACATTACTTTGC
GTGGTAGAGAGTCCAGCGGATGTTTCTGCCATAGAACAAAGCAATTCCTTTCAAGGTAAATATTTTGTCCTTATGGGAAA
AATTTCTCCTCTTGATGGCTTGGGACCTGATGACATAGGTCTACCGAAACTTAAGGAGTTAATTATTAGGGAAAAAATTC
AGGAAGTTATTCTTGCATTAAGCCCCAGTGTTGAAAGCCAGACCACAATTCATTTTATTCATCAGTTGCTAAAGGATGAA
ACCGTCAATATCAGTCAGTTAGCACATGGAATACCATCAGGTGGTGAATTAGAATTTTTAGATGGGAATACTATAAGCAG
TGCCCTTAAGAACAGAGCTGTGATTAATGTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
40.513 |
98.985 |
0.401 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
39.267 |
96.954 |
0.381 |