Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | CJO35_RS00265 | Genome accession | NZ_CP022874 |
| Coordinates | 48939..49229 (-) | Length | 96 a.a. |
| NCBI ID | WP_085959887.1 | Uniprot ID | - |
| Organism | Bacillus sp. 1s-1 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 43939..54229
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CJO35_RS00225 (CJO35_00225) | - | 43963..44292 (+) | 330 | WP_003178156.1 | cyclic-di-AMP receptor | - |
| CJO35_RS00230 (CJO35_00230) | - | 44304..44744 (+) | 441 | WP_003178158.1 | YaaR family protein | - |
| CJO35_RS00235 (CJO35_00235) | holB | 44756..45745 (+) | 990 | WP_003178160.1 | DNA polymerase III subunit delta' | - |
| CJO35_RS00240 (CJO35_00240) | - | 45748..46575 (+) | 828 | WP_003178162.1 | stage 0 sporulation family protein | - |
| CJO35_RS00245 (CJO35_00245) | yabA | 46590..46952 (+) | 363 | WP_003178164.1 | DNA replication initiation control protein YabA | - |
| CJO35_RS00250 (CJO35_00250) | - | 47017..47760 (+) | 744 | WP_003178166.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| CJO35_RS00255 (CJO35_00255) | - | 47747..48040 (+) | 294 | WP_003178169.1 | GIY-YIG nuclease family protein | - |
| CJO35_RS00260 (CJO35_00260) | rsmI | 48015..48890 (+) | 876 | WP_025805862.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| CJO35_RS00265 (CJO35_00265) | abrB | 48939..49229 (-) | 291 | WP_085959887.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| CJO35_RS00270 (CJO35_00270) | metG | 49737..51725 (+) | 1989 | WP_003178175.1 | methionine--tRNA ligase | - |
| CJO35_RS00275 (CJO35_00275) | - | 51810..52577 (+) | 768 | WP_003178177.1 | TatD family hydrolase | - |
| CJO35_RS00280 (CJO35_00280) | - | 52694..54019 (+) | 1326 | WP_021837373.1 | G5 and 3D domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10680.43 Da Isoelectric Point: 5.1848
>NTDB_id=242367 CJO35_RS00265 WP_085959887.1 48939..49229(-) (abrB) [Bacillus sp. 1s-1]
MNMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSPEG
AEQIINEIQAQLQSQK
MNMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSPEG
AEQIINEIQAQLQSQK
Nucleotide
Download Length: 291 bp
>NTDB_id=242367 CJO35_RS00265 WP_085959887.1 48939..49229(-) (abrB) [Bacillus sp. 1s-1]
ATGAATATGAAATCTACAGGTATTGTACGTAAAGTTGATGAACTAGGACGCGTGGTGATTCCAATCGAACTTCGCCGTAC
GCTTGGAATCGCAGAAAAAGACGCTCTTGAAATCTATGTAGATGACGAAAAAATCATCTTGAAAAAATATAAACCAAACA
TGACTTGCCAAGTTACAGGTGAGGTTTCTGATGACAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGCCCTGAAGGC
GCTGAGCAAATCATTAACGAAATTCAAGCACAACTTCAATCTCAAAAATAA
ATGAATATGAAATCTACAGGTATTGTACGTAAAGTTGATGAACTAGGACGCGTGGTGATTCCAATCGAACTTCGCCGTAC
GCTTGGAATCGCAGAAAAAGACGCTCTTGAAATCTATGTAGATGACGAAAAAATCATCTTGAAAAAATATAAACCAAACA
TGACTTGCCAAGTTACAGGTGAGGTTTCTGATGACAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGCCCTGAAGGC
GCTGAGCAAATCATTAACGAAATTCAAGCACAACTTCAATCTCAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
93.75 |
100 |
0.938 |