Detailed information NTG0242077

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: CCZ37_RS11925
• Genome accession: NZ_CP022741
• Coordinates: 2558735..2559742 (-)
• Length: 335 a.a.
• NCBI ID: WP_010318346.1
• Uniprot ID: -
• Organism: Vibrio qinghaiensis strain Q67
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2553735..2564742

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CCZ37_RS11900 (CCZ37_11885)	rraA	2554398..2554919 (-)	522	WP_094500602.1	ribonuclease E activity regulator RraA	-
CCZ37_RS11905 (CCZ37_11890)	-	2554996..2555913 (-)	918	WP_094500603.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
CCZ37_RS11910 (CCZ37_11895)	hslU	2556036..2557367 (-)	1332	WP_010317616.1	HslU--HslV peptidase ATPase subunit	-
CCZ37_RS11915 (CCZ37_11900)	hslV	2557403..2557969 (-)	567	WP_010317615.1	ATP-dependent protease subunit HslV	-
CCZ37_RS11920 (CCZ37_11905)	-	2558090..2558632 (-)	543	WP_064625975.1	SPOR domain-containing protein	-
CCZ37_RS11925 (CCZ37_11910)	cytR	2558735..2559742 (-)	1008	WP_010318346.1	DNA-binding transcriptional regulator CytR	Regulator
CCZ37_RS11930 (CCZ37_11915)	priA	2560048..2562249 (-)	2202	WP_094500604.1	primosomal protein N'	-
CCZ37_RS11935 (CCZ37_11920)	rpmE	2562518..2562733 (+)	216	WP_010318344.1	50S ribosomal protein L31	-
CCZ37_RS11940 (CCZ37_11925)	-	2562939..2564216 (+)	1278	WP_026027888.1	malic enzyme-like NAD(P)-binding protein	-
CCZ37_RS11945 (CCZ37_11930)	metJ	2564364..2564690 (-)	327	WP_010318342.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36800.39 Da
• Isoelectric Point: 6.3526

>NTDB_id=242077 CCZ37_RS11925 WP_010318346.1 2558735..2559742(-) (cytR) [Vibrio qinghaiensis strain Q67]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVAIVPDICDPYFTEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSLVNLVFTKQVDGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPAEATLCKFRHQGYQQALRRAGIEMNPNYCTYGDFTFEAGAKALRQLLASSEPPTA
IFSHNDSMAIGVIKEAKKLGLRVPQDISVVGFDDIQFALYCDPPLTTISQPRYEIGRQAMLMMLDLLRGQEVGAGSRLLE
TKLVIRESAAPPRLS

Nucleotide

• Length: 1008 bp

>NTDB_id=242077 CCZ37_RS11925 WP_010318346.1 2558735..2559742(-) (cytR) [Vibrio qinghaiensis strain Q67]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGTGTATCAACCGCCACAGTATCTAGGGCGTTGATGAACCCTGAAAA
AGTATCATCTTCAACGCGAAAGCGTGTCGAAGATGCCGTTTTAGAAGCTGGTTACTCACCAAATTCTCTCGCTCGCAACT
TACGCCGTAATGAATCCAAAACCATTGTCGCTATCGTGCCGGATATTTGTGACCCTTACTTCACCGAGATCATTCGTGGT
ATCGAAGATGCGGCGATGGAACATGGTTATTTAGTACTACTGGGTGATAGTGGTCAGCAGAAAAAGCGAGAAAGTTCGTT
AGTTAACCTCGTATTTACTAAGCAAGTTGATGGCATGTTGCTGCTAGGTACGGATTTGCCGTTTGATGTCAGTAAGCCTG
AACAAAAAAACCTGCCACCTATGGTGATGGCCTGTGAATTTGCGCCAGAACTTGAGTTGCCAACGGTACATATTGATAAC
CTTACCTCAGCGTTTGAGGCGGTGAACTACCTTACGCAGCTTGGGCACAAACGCATCGCGCAAATTTCAGGGCCAGCAGA
GGCAACCTTGTGTAAGTTCCGCCATCAAGGTTATCAACAAGCCTTACGCCGTGCAGGGATTGAAATGAATCCTAATTATT
GCACTTATGGTGATTTTACTTTTGAAGCCGGGGCTAAAGCACTGCGCCAATTATTGGCGTCATCTGAGCCCCCCACCGCC
ATTTTTAGTCATAATGACAGTATGGCGATCGGTGTCATTAAGGAAGCCAAAAAATTGGGTTTGCGCGTTCCACAAGATAT
TTCAGTGGTGGGATTTGATGATATTCAATTTGCGCTCTACTGCGATCCACCGTTAACGACCATATCACAGCCGCGCTATG
AGATAGGGCGTCAAGCGATGCTCATGATGCTCGATCTTCTTCGTGGTCAAGAGGTTGGCGCAGGTTCTCGACTATTAGAA
ACCAAGTTAGTGATTCGAGAAAGCGCAGCGCCTCCTCGTTTGAGCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	91.265	99.104	0.904
cytR	Vibrio parahaemolyticus RIMD 2210633	86.787	99.403	0.863