Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | ABC_RS15095 | Genome accession | NC_006582 |
| Coordinates | 3022899..3023852 (-) | Length | 317 a.a. |
| NCBI ID | WP_011247737.1 | Uniprot ID | Q5WDY1 |
| Organism | Shouchella clausii KSM-K16 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3017899..3028852
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABC_RS15065 (ABC2889) | - | 3017964..3018587 (+) | 624 | WP_011247731.1 | deoxynucleoside kinase | - |
| ABC_RS15070 (ABC2890) | - | 3018599..3019228 (+) | 630 | WP_011247732.1 | deoxynucleoside kinase | - |
| ABC_RS15075 (ABC2891) | - | 3019267..3019875 (-) | 609 | WP_011247733.1 | restriction endonuclease | - |
| ABC_RS15080 (ABC2892) | - | 3020050..3021021 (-) | 972 | WP_011247734.1 | siderophore ABC transporter substrate-binding protein | - |
| ABC_RS15085 (ABC2893) | - | 3021138..3021959 (-) | 822 | WP_011247735.1 | ABC transporter ATP-binding protein | - |
| ABC_RS15090 (ABC2894) | - | 3021956..3022909 (-) | 954 | WP_050748991.1 | iron chelate uptake ABC transporter family permease subunit | - |
| ABC_RS15095 (ABC2895) | ceuB | 3022899..3023852 (-) | 954 | WP_011247737.1 | ABC transporter permease | Machinery gene |
| ABC_RS15100 (ABC2896) | - | 3024002..3024628 (-) | 627 | WP_011247738.1 | phosphatase PAP2 family protein | - |
| ABC_RS15105 (ABC2897) | - | 3024871..3026268 (+) | 1398 | WP_011247739.1 | L-cystine transporter | - |
| ABC_RS15110 (ABC2898) | - | 3026313..3026786 (-) | 474 | WP_011247740.1 | small multi-drug export protein | - |
| ABC_RS15115 (ABC2899) | - | 3026875..3027333 (+) | 459 | WP_011247741.1 | DinB family protein | - |
| ABC_RS15120 (ABC2900) | - | 3027362..3027742 (-) | 381 | WP_011247742.1 | YisL family protein | - |
| ABC_RS15125 (ABC2901) | - | 3027817..3028314 (-) | 498 | WP_011247743.1 | CcdC family protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35003.22 Da Isoelectric Point: 10.1201
>NTDB_id=24186 ABC_RS15095 WP_011247737.1 3022899..3023852(-) (ceuB) [Shouchella clausii KSM-K16]
MKIKYLLPLLLILSFASLFIGVQDISPLDLFRLDDEDVQTLVISRIPRLLSVLIVGVSLSVCGLIMQQLTQNKFVSPTTA
GTMDWARLGILVAVVVFTQATTLQRMFIAFLFALFGTFLFMKILERIRFKNVVFVPLVGLMLGSVVNSITTFLAYRYDLV
QSLSSWMQGSFSLVLKGRYEILYIGIPLVVIAFLFANRFTVAGMGKDFSTNLGLNYNQIMNIGLFIVAMITATIVVTIGS
IPFLGLVIPNIVSIIRGDNLKNSLPHTALLGAIFLLACDILGRVLIYPYEIPIGLVVGVVGSAIFLYLLLRRRSHAA
MKIKYLLPLLLILSFASLFIGVQDISPLDLFRLDDEDVQTLVISRIPRLLSVLIVGVSLSVCGLIMQQLTQNKFVSPTTA
GTMDWARLGILVAVVVFTQATTLQRMFIAFLFALFGTFLFMKILERIRFKNVVFVPLVGLMLGSVVNSITTFLAYRYDLV
QSLSSWMQGSFSLVLKGRYEILYIGIPLVVIAFLFANRFTVAGMGKDFSTNLGLNYNQIMNIGLFIVAMITATIVVTIGS
IPFLGLVIPNIVSIIRGDNLKNSLPHTALLGAIFLLACDILGRVLIYPYEIPIGLVVGVVGSAIFLYLLLRRRSHAA
Nucleotide
Download Length: 954 bp
>NTDB_id=24186 ABC_RS15095 WP_011247737.1 3022899..3023852(-) (ceuB) [Shouchella clausii KSM-K16]
ATGAAAATAAAATATTTACTCCCTTTGCTTTTAATTTTATCGTTTGCATCTTTATTTATTGGCGTACAGGATATATCGCC
ACTTGACTTATTTCGTTTAGACGATGAAGATGTGCAAACACTTGTCATTAGCCGTATCCCCCGTCTATTGAGTGTATTGA
TTGTTGGTGTTAGTTTAAGCGTTTGCGGTTTAATTATGCAGCAGCTTACACAAAACAAATTTGTTTCGCCGACAACAGCT
GGAACTATGGATTGGGCCCGGCTTGGCATTCTTGTCGCCGTGGTTGTTTTTACACAAGCGACCACGTTGCAAAGGATGTT
TATTGCCTTTCTTTTTGCGTTGTTTGGAACGTTTCTTTTTATGAAAATACTGGAGCGCATCCGCTTTAAAAACGTTGTGT
TTGTCCCGCTTGTCGGGCTTATGTTAGGCAGTGTGGTCAACTCAATCACGACTTTTCTAGCTTACCGGTATGATTTAGTG
CAAAGCTTGTCTTCTTGGATGCAAGGGAGCTTTTCACTCGTTCTTAAAGGGCGCTATGAAATTTTATACATAGGCATTCC
CCTTGTTGTCATTGCCTTTTTATTCGCAAATCGCTTTACGGTAGCAGGAATGGGGAAGGATTTTTCGACAAACTTGGGCT
TAAATTATAACCAAATTATGAATATCGGCCTTTTCATTGTCGCGATGATCACGGCTACGATTGTCGTCACAATTGGCTCG
ATTCCTTTTTTAGGGCTAGTCATTCCTAACATCGTTTCGATTATAAGAGGGGACAACTTAAAAAACAGTTTGCCTCATAC
AGCGCTATTAGGCGCCATTTTCTTGCTCGCTTGTGATATTTTAGGGCGTGTTCTCATTTATCCATATGAAATTCCGATTG
GACTGGTCGTTGGGGTTGTCGGGAGCGCGATCTTTTTGTACTTGCTCTTAAGGAGACGATCTCATGCAGCCTAA
ATGAAAATAAAATATTTACTCCCTTTGCTTTTAATTTTATCGTTTGCATCTTTATTTATTGGCGTACAGGATATATCGCC
ACTTGACTTATTTCGTTTAGACGATGAAGATGTGCAAACACTTGTCATTAGCCGTATCCCCCGTCTATTGAGTGTATTGA
TTGTTGGTGTTAGTTTAAGCGTTTGCGGTTTAATTATGCAGCAGCTTACACAAAACAAATTTGTTTCGCCGACAACAGCT
GGAACTATGGATTGGGCCCGGCTTGGCATTCTTGTCGCCGTGGTTGTTTTTACACAAGCGACCACGTTGCAAAGGATGTT
TATTGCCTTTCTTTTTGCGTTGTTTGGAACGTTTCTTTTTATGAAAATACTGGAGCGCATCCGCTTTAAAAACGTTGTGT
TTGTCCCGCTTGTCGGGCTTATGTTAGGCAGTGTGGTCAACTCAATCACGACTTTTCTAGCTTACCGGTATGATTTAGTG
CAAAGCTTGTCTTCTTGGATGCAAGGGAGCTTTTCACTCGTTCTTAAAGGGCGCTATGAAATTTTATACATAGGCATTCC
CCTTGTTGTCATTGCCTTTTTATTCGCAAATCGCTTTACGGTAGCAGGAATGGGGAAGGATTTTTCGACAAACTTGGGCT
TAAATTATAACCAAATTATGAATATCGGCCTTTTCATTGTCGCGATGATCACGGCTACGATTGTCGTCACAATTGGCTCG
ATTCCTTTTTTAGGGCTAGTCATTCCTAACATCGTTTCGATTATAAGAGGGGACAACTTAAAAAACAGTTTGCCTCATAC
AGCGCTATTAGGCGCCATTTTCTTGCTCGCTTGTGATATTTTAGGGCGTGTTCTCATTTATCCATATGAAATTCCGATTG
GACTGGTCGTTGGGGTTGTCGGGAGCGCGATCTTTTTGTACTTGCTCTTAAGGAGACGATCTCATGCAGCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
49.367 |
99.685 |
0.492 |