Detailed information
Bioinformatically predicted
Overview
| Name | radC | Type | Machinery gene |
| Locus tag | LPP_RS12880 | Genome accession | NC_006368 |
| Coordinates | 2904744..2905427 (+) | Length | 227 a.a. |
| NCBI ID | WP_014844635.1 | Uniprot ID | Q5X240 |
| Organism | Legionella pneumophila str. Paris | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2899744..2910427
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPP_RS12860 (lpp2549) | - | 2899758..2901491 (+) | 1734 | WP_014844631.1 | tetratricopeptide repeat protein | - |
| LPP_RS12865 (lpp2550) | - | 2901597..2902985 (-) | 1389 | WP_014844632.1 | phosphomannomutase/phosphoglucomutase | - |
| LPP_RS12870 (lpp2551) | dut | 2902986..2903444 (-) | 459 | WP_014844633.1 | dUTP diphosphatase | - |
| LPP_RS12875 (lpp2552) | coaBC | 2903471..2904667 (-) | 1197 | WP_014844634.1 | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC | - |
| LPP_RS12880 (lpp2553) | radC | 2904744..2905427 (+) | 684 | WP_014844635.1 | RadC family protein | Machinery gene |
| LPP_RS12885 (lpp2554) | - | 2905463..2905699 (+) | 237 | WP_014844636.1 | hypothetical protein | - |
| LPP_RS12890 (lpp2555) | lepB | 2905779..2909663 (+) | 3885 | WP_014844637.1 | Dot/Icm T4SS GTPase-activating effector LepB | - |
| LPP_RS12895 (lpp2556) | thpR | 2909787..2910350 (-) | 564 | WP_015961643.1 | RNA 2',3'-cyclic phosphodiesterase | - |
Sequence
Protein
Download Length: 227 a.a. Molecular weight: 25769.41 Da Isoelectric Point: 6.7654
>NTDB_id=24165 LPP_RS12880 WP_014844635.1 2904744..2905427(+) (radC) [Legionella pneumophila str. Paris]
MMVAHTAQQLDLREKLLTNGVHSLSDIELLAIFISSGNNRKSCLQLAYELTKHLGNLRNILNADLQSFKSIHGLGEVRYA
QLQAAKEICHRSDFIDLQKEIRLSNTQQTYAFLKKRLRDYKNETFAALFLDNQHRIIAYEELFSGTINTATVYPRPIVER
VLQLNAAALILAHNHPSGLSDASQQDLAITERIRDALDLVDARLLDHIVIGDNEVYSIFAENKWVCN
MMVAHTAQQLDLREKLLTNGVHSLSDIELLAIFISSGNNRKSCLQLAYELTKHLGNLRNILNADLQSFKSIHGLGEVRYA
QLQAAKEICHRSDFIDLQKEIRLSNTQQTYAFLKKRLRDYKNETFAALFLDNQHRIIAYEELFSGTINTATVYPRPIVER
VLQLNAAALILAHNHPSGLSDASQQDLAITERIRDALDLVDARLLDHIVIGDNEVYSIFAENKWVCN
Nucleotide
Download Length: 684 bp
>NTDB_id=24165 LPP_RS12880 WP_014844635.1 2904744..2905427(+) (radC) [Legionella pneumophila str. Paris]
ATGATGGTTGCCCATACAGCGCAGCAACTTGACTTGCGCGAAAAATTACTTACTAATGGAGTACATAGCCTCTCTGATAT
CGAATTGTTAGCCATTTTCATCAGTTCGGGTAACAATAGAAAATCTTGTTTGCAACTAGCCTATGAGCTTACCAAACACT
TGGGAAATTTACGTAATATCCTCAATGCTGATCTGCAAAGCTTTAAATCAATCCATGGATTAGGAGAAGTTCGCTATGCG
CAACTTCAGGCTGCGAAAGAAATATGTCATCGTAGTGATTTCATTGATCTGCAAAAAGAAATCCGGTTATCTAACACGCA
ACAAACTTATGCTTTTTTAAAAAAACGACTGCGAGACTACAAAAATGAAACTTTTGCCGCACTCTTTCTGGATAACCAAC
ACCGAATCATTGCTTATGAAGAATTATTCTCAGGAACCATCAACACAGCAACAGTCTATCCCAGACCGATTGTAGAACGT
GTATTGCAATTAAATGCTGCTGCTTTAATTCTGGCACATAATCACCCCTCGGGCTTGTCTGACGCAAGCCAGCAAGATTT
AGCCATTACAGAACGCATTCGAGATGCTCTGGACCTGGTAGATGCCCGGTTACTGGATCACATTGTCATTGGGGATAATG
AAGTGTATTCCATTTTTGCTGAGAACAAATGGGTATGTAACTAG
ATGATGGTTGCCCATACAGCGCAGCAACTTGACTTGCGCGAAAAATTACTTACTAATGGAGTACATAGCCTCTCTGATAT
CGAATTGTTAGCCATTTTCATCAGTTCGGGTAACAATAGAAAATCTTGTTTGCAACTAGCCTATGAGCTTACCAAACACT
TGGGAAATTTACGTAATATCCTCAATGCTGATCTGCAAAGCTTTAAATCAATCCATGGATTAGGAGAAGTTCGCTATGCG
CAACTTCAGGCTGCGAAAGAAATATGTCATCGTAGTGATTTCATTGATCTGCAAAAAGAAATCCGGTTATCTAACACGCA
ACAAACTTATGCTTTTTTAAAAAAACGACTGCGAGACTACAAAAATGAAACTTTTGCCGCACTCTTTCTGGATAACCAAC
ACCGAATCATTGCTTATGAAGAATTATTCTCAGGAACCATCAACACAGCAACAGTCTATCCCAGACCGATTGTAGAACGT
GTATTGCAATTAAATGCTGCTGCTTTAATTCTGGCACATAATCACCCCTCGGGCTTGTCTGACGCAAGCCAGCAAGATTT
AGCCATTACAGAACGCATTCGAGATGCTCTGGACCTGGTAGATGCCCGGTTACTGGATCACATTGTCATTGGGGATAATG
AAGTGTATTCCATTTTTGCTGAGAACAAATGGGTATGTAACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| radC | Haemophilus influenzae Rd KW20 |
44.393 |
94.273 |
0.419 |