Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | CGP84_RS07990 | Genome accession | NZ_CP022682 |
| Coordinates | 1601714..1602013 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844415.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain 78 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1596714..1607013
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CGP84_RS07965 (CGP84_01468) | gcvPA | 1597926..1599272 (-) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| CGP84_RS07970 (CGP84_01469) | gcvT | 1599292..1600383 (-) | 1092 | WP_000093354.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| CGP84_RS07975 (CGP84_01470) | - | 1600542..1601066 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| CGP84_RS07980 | - | 1601056..1601202 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| CGP84_RS07985 (CGP84_01471) | comGF | 1601299..1601796 (-) | 498 | WP_115288401.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| CGP84_RS07990 (CGP84_01472) | comGE | 1601714..1602013 (-) | 300 | WP_000844415.1 | hypothetical protein | Machinery gene |
| CGP84_RS07995 (CGP84_01473) | comGD | 1602000..1602446 (-) | 447 | WP_072357807.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| CGP84_RS08000 (CGP84_01474) | comGC | 1602424..1602735 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| CGP84_RS08005 (CGP84_01475) | comGB | 1602749..1603819 (-) | 1071 | WP_000776413.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| CGP84_RS08010 (CGP84_01476) | comGA | 1603791..1604765 (-) | 975 | WP_115288402.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| CGP84_RS08015 (CGP84_01477) | - | 1604817..1605440 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| CGP84_RS08020 (CGP84_01478) | - | 1605437..1605766 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| CGP84_RS08025 (CGP84_01479) | - | 1605766..1606752 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| CGP84_RS08030 | - | 1606749..1606952 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11135.28 Da Isoelectric Point: 9.9215
>NTDB_id=241612 CGP84_RS07990 WP_000844415.1 1601714..1602013(-) (comGE) [Staphylococcus aureus strain 78]
MKSYKCKGSFLIDSMAGFLLIVLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIVLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=241612 CGP84_RS07990 WP_000844415.1 1601714..1602013(-) (comGE) [Staphylococcus aureus strain 78]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGTATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGTATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |
| comGE | Staphylococcus aureus N315 |
97.98 |
100 |
0.98 |