Detailed information NTG0241592

Bioinformatically predicted

Overview

• Name: clpE
• Type: Regulator
• Locus tag: CHF41_RS09425
• Genome accession: NZ_CP022680
• Coordinates: 1957616..1959829 (+)
• Length: 737 a.a.
• NCBI ID: WP_119877034.1
• Uniprot ID: -
• Organism: Streptococcus respiraculi strain HTS25
• Function: degradation of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 1952616..1964829

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CHF41_RS09405	-	1954452..1955318 (-)	867	WP_420852852.1	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	-
CHF41_RS09410	-	1955548..1956282 (-)	735	WP_119877032.1	amino acid ABC transporter ATP-binding protein	-
CHF41_RS09415	-	1956275..1956964 (-)	690	WP_119877033.1	amino acid ABC transporter permease	-
CHF41_RS09420	-	1957101..1957331 (-)	231	WP_075099328.1	DUF1797 family protein	-
CHF41_RS09425	clpE	1957616..1959829 (+)	2214	WP_119877034.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
CHF41_RS09430	-	1959993..1960445 (+)	453	WP_119877035.1	NUDIX hydrolase	-
CHF41_RS09435	-	1960539..1960841 (+)	303	WP_119877036.1	DUF1827 family protein	-
CHF41_RS09440	-	1961077..1961829 (-)	753	WP_119877037.1	DUF6261 family protein	-

Sequence

Protein

• Length: 737 a.a.
• Molecular weight: 81853.27 Da
• Isoelectric Point: 5.2744

>NTDB_id=241592 CHF41_RS09425 WP_119877034.1 1957616..1959829(+) (clpE) [Streptococcus respiraculi strain HTS25]
MLCHNCNINDATIHLYTNLNGKQQQVDLCHNCYQIMKTDPNNAILKGLGDLANPNSMDPFSEFFNNIGGIPGHTPAGKPR
NQTPPTQAGGGNRGNNGGPTPPPQQPKGLLDEFGINVTEIARRGDIDPVIGRDEEIKRVIEILNRRTKNNPVLIGEPGVG
KTAVVEGLAQKIVDGDVPQKLQGREVIRLDVVSLVQGTGIRGQFEERMQKLMEEIRNRKEIILFIDEIHEIVGAGSAGDG
NMDAGNILKPALARGEMQLVGATTLNEYRIIEKDAALERRMQPVKVDEPSVDETITILKGIQSKYQDYHHVKYTDEAIEA
AAILSNRYIQDRFLPDKAIDLLDEAGSKMNLTLNFVDPKEIDQRLIDAENRKAQATRDEDFEKAAYYRDQIAKYKEMQKA
TISEEDIPVITEKEIEAIIEQKTNIPVGDLKEKEQSQLINLASDLKAHVIGQDEAVDKISKAIRRNRVGLGAPNRPIGSF
LFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHAVAKLVGAPPGYVGYEEAGQLTEKVRRNPYSLILLDEIEK
AHPDVMHMFLQVLDDGRLTDGQGRTVSFKDTIIIMTSNAGTGKVEASVGFGAALEGRTQSVLGQLSNFFSPEFMNRFDGI
IEFHALNKENLLHIVDLMLLDVNKRLETTGLTLHVTDKVKEKLVDLGYDPKMGARPLRRTIQEYIEDPLTDFYLEHPEEK
NLRAVLTSKGTISIKAK

Nucleotide

• Length: 2214 bp

>NTDB_id=241592 CHF41_RS09425 WP_119877034.1 1957616..1959829(+) (clpE) [Streptococcus respiraculi strain HTS25]
ATGCTTTGTCATAACTGTAATATCAATGATGCAACCATTCATCTTTATACAAATCTTAACGGAAAACAACAACAAGTAGA
CCTCTGCCACAACTGCTACCAAATCATGAAAACAGATCCTAACAATGCTATTTTAAAAGGCTTGGGCGACCTTGCCAATC
CAAATAGCATGGATCCCTTTAGCGAATTTTTCAATAATATCGGAGGCATCCCAGGACACACGCCTGCTGGAAAACCGCGC
AACCAAACTCCGCCAACCCAAGCAGGGGGAGGCAACCGTGGAAACAACGGAGGTCCAACTCCTCCACCACAACAACCAAA
AGGCTTGCTAGACGAATTTGGTATCAACGTGACAGAAATTGCTCGCCGTGGAGACATCGACCCTGTCATCGGACGCGACG
AGGAAATCAAGCGTGTCATCGAAATCCTCAACCGCAGAACTAAGAACAATCCTGTCCTTATCGGGGAACCCGGTGTCGGA
AAAACAGCTGTTGTCGAAGGCCTAGCCCAAAAAATTGTCGACGGGGATGTCCCACAAAAACTCCAAGGACGTGAAGTCAT
CCGCCTTGATGTAGTCAGCCTCGTTCAAGGTACTGGTATCCGCGGTCAATTTGAAGAACGCATGCAAAAACTCATGGAAG
AAATCCGCAATCGCAAGGAAATCATTCTCTTTATTGATGAAATTCATGAGATTGTAGGTGCTGGCTCTGCTGGTGATGGC
AACATGGATGCGGGGAATATTTTGAAACCCGCTCTTGCTCGTGGGGAAATGCAGCTGGTCGGTGCGACTACGCTCAACGA
ATACCGCATTATTGAAAAAGATGCAGCCTTGGAGCGGCGCATGCAGCCTGTAAAGGTCGATGAGCCAAGTGTGGACGAGA
CCATTACTATTCTAAAAGGAATCCAAAGTAAGTACCAAGACTATCATCATGTCAAATACACCGATGAAGCCATTGAAGCA
GCTGCTATCTTGTCCAACCGCTACATTCAAGATCGCTTCTTGCCAGACAAGGCTATTGACTTGCTGGACGAAGCCGGTTC
TAAGATGAACTTGACCTTGAATTTCGTTGATCCAAAAGAGATTGACCAACGCTTGATTGACGCTGAAAATCGCAAGGCCC
AGGCCACTCGTGATGAGGACTTTGAAAAAGCAGCCTACTACCGCGACCAAATCGCCAAATACAAGGAAATGCAAAAAGCA
ACGATTAGCGAAGAAGATATTCCCGTCATTACGGAAAAAGAAATCGAAGCCATTATCGAGCAAAAAACCAATATTCCTGT
TGGAGATTTGAAAGAAAAAGAACAGTCACAATTGATCAACCTAGCCAGCGACTTAAAAGCCCATGTCATCGGTCAAGATG
AAGCTGTTGATAAGATTTCTAAGGCTATTCGTCGCAATCGGGTCGGTCTCGGCGCACCGAACCGTCCAATCGGAAGTTTC
CTTTTCGTTGGACCAACAGGGGTCGGAAAAACCGAGCTATCAAAACAACTAGCCATTGAACTGTTCGGTTCTGCCGATAG
CATGATTCGCTTTGACATGTCTGAGTACATGGAAAAACACGCCGTCGCAAAATTAGTCGGAGCGCCTCCAGGCTATGTAG
GCTACGAAGAAGCTGGACAATTGACAGAAAAAGTCCGCCGCAATCCATACTCTCTTATCCTACTTGATGAAATTGAAAAA
GCCCACCCAGATGTCATGCACATGTTCCTCCAAGTCCTTGATGACGGTCGCTTGACAGACGGACAAGGTCGCACTGTTAG
CTTCAAAGATACCATTATCATCATGACCTCCAACGCTGGAACAGGTAAGGTCGAAGCCAGTGTCGGTTTCGGTGCTGCTC
TTGAAGGACGAACCCAGTCTGTCCTCGGTCAGTTGAGCAACTTCTTCAGTCCAGAATTTATGAACCGCTTTGACGGCATT
ATCGAATTCCACGCCCTCAACAAGGAAAACCTCCTTCACATTGTGGATCTTATGCTCCTTGATGTGAACAAACGCTTGGA
AACAACAGGACTTACTCTCCACGTGACCGATAAAGTCAAGGAAAAATTAGTCGATTTAGGCTACGATCCGAAAATGGGTG
CTCGTCCGCTTCGCAGAACCATTCAAGAGTACATTGAAGACCCATTGACTGACTTCTATTTGGAACATCCTGAAGAAAAG
AACCTTCGCGCTGTTTTAACCAGCAAGGGTACGATTTCTATCAAAGCAAAATGA

Domains

Predicted by InterproScan.

• AAA lid domain (AAA_lid_9) (290-388)

• AAA domain (Cdc48 subfamily) (AAA_2) (475-638)

• ATPase family associated with various cellular activities (AAA) (AAA) (152-271)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (646-717)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpE	Streptococcus pneumoniae Rx1	81.976	100	0.833
clpE	Streptococcus pneumoniae D39	81.976	100	0.833
clpE	Streptococcus pneumoniae R6	81.976	100	0.833
clpE	Streptococcus pneumoniae TIGR4	81.976	100	0.833
clpE	Streptococcus mutans UA159	81.561	100	0.822
clpC	Lactococcus lactis subsp. cremoris KW2	79.339	98.507	0.782
clpC	Bacillus subtilis subsp. subtilis str. 168	51.183	91.723	0.469
clpC	Streptococcus thermophilus LMD-9	47.717	86.16	0.411
clpC	Streptococcus thermophilus LMG 18311	47.402	86.16	0.408
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	47.611	85.21	0.406
clpC	Streptococcus mutans UA159	47.833	84.532	0.404
clpC	Streptococcus pneumoniae D39	47.36	84.803	0.402
clpC	Streptococcus pneumoniae Rx1	47.36	84.803	0.402
clpC	Streptococcus pneumoniae TIGR4	47.36	84.803	0.402