Detailed information NTG0241545

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: CHF41_RS01515
• Genome accession: NZ_CP022680
• Coordinates: 299726..302176 (+)
• Length: 816 a.a.
• NCBI ID: WP_119875707.1
• Uniprot ID: -
• Organism: Streptococcus respiraculi strain HTS25
• Function: degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 294726..307176

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CHF41_RS01485	-	294842..296200 (+)	1359	WP_119875702.1	peptidoglycan amidohydrolase family protein	-
CHF41_RS01495	rpsB	296693..297475 (+)	783	WP_119875703.1	30S ribosomal protein S2	-
CHF41_RS01500	tsf	297558..298598 (+)	1041	WP_119875704.1	translation elongation factor Ts	-
CHF41_RS01505	traF	298682..299026 (-)	345	WP_119875705.1	conjugal transfer protein TraF	-
CHF41_RS01510	-	299266..299724 (+)	459	WP_119875706.1	CtsR family transcriptional regulator	-
CHF41_RS01515	clpC	299726..302176 (+)	2451	WP_119875707.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
CHF41_RS01520	dusB	302315..303307 (-)	993	WP_119875708.1	tRNA dihydrouridine synthase DusB	-
CHF41_RS01525	hslO	303300..304166 (-)	867	WP_119875709.1	Hsp33 family molecular chaperone HslO	-
CHF41_RS01530	-	304658..305608 (-)	951	WP_119875710.1	1-phosphofructokinase family hexose kinase	-
CHF41_RS01535	-	305633..306370 (-)	738	WP_119875711.1	DeoR/GlpR family DNA-binding transcription regulator	-
CHF41_RS01540	-	306592..307047 (+)	456	WP_119875712.1	PTS sugar transporter subunit IIA	-

Sequence

Protein

• Length: 816 a.a.
• Molecular weight: 90182.33 Da
• Isoelectric Point: 6.0067

>NTDB_id=241545 CHF41_RS01515 WP_119875707.1 299726..302176(+) (clpC) [Streptococcus respiraculi strain HTS25]
MKFSNGLQRAYEDAQLIGQRYMCDYLETWHLLLAFVINPDTIAGAVLADYPADVTDYEQATYMVTERVYREELEDFTLLQ
SSKRLDEAARFAHKIAEVVKAKQIGTEHLFMAMLLDKRSIASQILDKAGFHFEDSDTKIRFIDLRKNLEAKAGFTKEDLK
SIRSILKGGKASRPTMANMMGMPPAPQTGGLEDYTRDLTALARAGQIEPVIGREAEISRMIQVLSRKTKNNPVLVGDAGV
GKTALALGLAQRVADGEVPASLAKMRVLELDLMNVIAGTRFRGDFEERMNNIINDIEEDGQVILFIDELHTIMGSGSGID
STLDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALSRRFAKVTVEEPSVADSIAILQGLKNAYERHHKIQITDEAV
STAVTFAKRYLTSKNLPDSAIDLLDEASATVQNQQKTGGKQSSLSAADKALMAGKHKTVSQLLIKELEAESQETLGDAQV
TEEDVLLTLSRLSGIPVAKLSQTDVKKYLSLEAELHKRVIGQDAAVSAVSRAIRRNQSGIRTGKRPIGSFMFLGPTGVGK
TELAKALAEILFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYAVLLFDEVEKAHPDTFNILL
QVLDDGVLTDSKGRKVDFSNTLIIMTSNLGATALRDDKTVGFGALDLSQSQEHVEKRIFEELKKAYRPEFINRIDEKIVF
HSLTDQDMQAVVKVMIRPLQAVMSEKAIQFKIQPSALKLLAQEGYDREMGARPLRRLIQTKVEDPLAEMLLRGELQAGDT
LKIGVKAGKLNFDISR

Nucleotide

• Length: 2451 bp

>NTDB_id=241545 CHF41_RS01515 WP_119875707.1 299726..302176(+) (clpC) [Streptococcus respiraculi strain HTS25]
ATGAAATTTTCAAATGGACTACAGCGTGCTTATGAAGATGCCCAGCTAATCGGGCAACGGTATATGTGCGATTACTTAGA
GACGTGGCATCTGTTGCTGGCTTTTGTTATCAATCCTGACACAATTGCAGGAGCTGTTTTGGCAGATTATCCTGCTGATG
TTACGGATTATGAACAAGCGACTTATATGGTGACCGAGCGTGTCTACCGTGAGGAACTAGAGGATTTCACCCTTTTACAG
AGTTCAAAGCGACTTGACGAAGCAGCTCGTTTTGCTCATAAGATTGCAGAAGTCGTCAAAGCTAAGCAGATCGGGACAGA
GCATTTGTTTATGGCCATGCTTCTTGACAAGCGTTCAATTGCTTCTCAAATCTTGGATAAGGCTGGGTTTCATTTTGAGG
ATTCAGATACCAAGATTCGTTTCATTGATTTGCGTAAGAACTTAGAAGCAAAGGCTGGATTTACGAAGGAAGATTTGAAG
TCGATTCGTAGTATCCTGAAAGGCGGCAAGGCGAGTCGTCCAACTATGGCCAATATGATGGGTATGCCCCCAGCACCACA
AACAGGTGGTTTGGAAGATTATACACGGGATTTAACCGCCCTAGCGCGTGCGGGTCAGATTGAACCTGTTATTGGACGTG
AAGCTGAAATTTCCCGCATGATTCAGGTCCTTTCGCGTAAGACCAAGAACAATCCTGTCTTGGTCGGAGATGCAGGGGTT
GGTAAAACAGCACTTGCCTTGGGCTTGGCTCAACGGGTAGCAGACGGTGAAGTGCCAGCTAGTCTAGCCAAGATGCGGGT
CTTGGAGTTGGACTTGATGAATGTCATTGCAGGAACGCGTTTCCGTGGTGACTTTGAAGAGCGAATGAACAATATCATCA
ATGATATTGAAGAAGACGGCCAAGTCATTCTCTTCATCGATGAGTTACATACCATCATGGGTTCTGGCAGTGGAATTGAT
TCAACCCTAGATGCAGCAAATATCTTGAAACCAGCTCTTGCGCGGGGAACCTTGCGGACAGTAGGAGCGACGACCCAAGA
TGAGTATCAAAAACATATTGAAAAAGATGCGGCTCTCTCCCGTCGTTTTGCCAAGGTAACGGTCGAAGAGCCTAGTGTGG
CTGATAGTATTGCCATTTTGCAAGGCTTAAAGAATGCCTACGAACGCCACCATAAAATTCAGATTACCGATGAGGCAGTT
AGCACTGCCGTAACCTTTGCCAAGCGGTATTTGACTAGTAAAAATTTACCAGACTCAGCGATTGACTTGCTCGATGAGGC
TAGTGCAACAGTGCAAAATCAACAAAAAACAGGTGGGAAACAGTCTAGCTTATCCGCAGCAGACAAGGCGCTTATGGCTG
GAAAACACAAGACGGTCAGTCAGTTGCTCATCAAGGAATTAGAGGCTGAAAGTCAAGAGACGTTGGGTGATGCCCAAGTA
ACAGAAGAAGATGTCCTGTTGACACTTAGCCGTTTATCAGGCATTCCAGTGGCTAAATTGAGCCAGACAGATGTTAAGAA
ATACTTGAGTCTAGAAGCCGAGTTGCACAAGCGGGTGATTGGACAGGACGCAGCTGTTTCTGCGGTCAGTCGTGCCATTC
GCCGTAATCAATCAGGAATTAGGACTGGTAAACGCCCAATTGGCTCCTTCATGTTCTTGGGACCTACTGGGGTCGGAAAG
ACCGAATTGGCCAAGGCCTTGGCAGAAATCTTGTTTGATGACGAGTCAGCCCTCATTCGTTTTGATATGAGTGAGTATAT
GGAAAAATTCGCAGCCAGCCGTTTGAATGGTGCCCCTCCGGGCTATGTCGGCTATGAAGAAGGTGGGGAGTTAACCGAAA
AAGTACGGAACAAACCATACGCTGTCCTACTTTTTGATGAGGTTGAAAAAGCCCACCCTGATACCTTTAACATTCTCTTG
CAGGTATTGGATGACGGTGTCTTAACTGATAGTAAGGGGCGGAAAGTTGATTTTTCAAATACCCTCATTATCATGACTTC
AAACCTTGGGGCAACAGCCTTGCGCGATGATAAGACCGTTGGCTTTGGCGCACTTGATTTATCGCAGAGTCAGGAACACG
TTGAAAAACGGATTTTTGAAGAATTGAAAAAGGCCTATCGACCAGAGTTTATCAACCGGATTGATGAAAAAATCGTCTTC
CATAGCTTGACTGACCAAGATATGCAAGCGGTAGTGAAAGTGATGATTCGTCCGCTTCAAGCAGTCATGTCTGAAAAAGC
TATTCAGTTCAAGATTCAACCATCTGCCTTGAAATTATTGGCGCAAGAAGGTTATGATCGGGAAATGGGAGCACGTCCGC
TCCGCCGCCTAATTCAGACGAAAGTTGAAGATCCTCTAGCTGAAATGCTCCTTCGTGGAGAATTACAGGCGGGAGACACA
TTGAAAATCGGTGTCAAGGCTGGAAAATTGAATTTTGATATCAGTCGCTAA

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (723-803)

• ATPase family associated with various cellular activities (AAA) (AAA) (233-364)

• AAA lid domain (AAA_lid_9) (372-455)

• AAA domain (Cdc48 subfamily) (AAA_2) (545-716)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (92-130)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (14-60)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Streptococcus pneumoniae TIGR4	71.569	100	0.716
clpC	Streptococcus pneumoniae Rx1	71.446	100	0.714
clpC	Streptococcus pneumoniae D39	71.446	100	0.714
clpC	Streptococcus mutans UA159	65.111	99.755	0.65
clpC	Streptococcus thermophilus LMD-9	63.692	100	0.638
clpC	Streptococcus thermophilus LMG 18311	63.57	100	0.637
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	47.784	100	0.489
clpC	Bacillus subtilis subsp. subtilis str. 168	42.789	100	0.44