Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | CIB87_RS14790 | Genome accession | NZ_CP022674 |
| Coordinates | 2897539..2897961 (+) | Length | 140 a.a. |
| NCBI ID | WP_013083984.1 | Uniprot ID | A0A1Q8UP88 |
| Organism | Priestia megaterium strain SR7 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 2892539..2902961
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CIB87_RS14765 (CIB87_14725) | - | 2892741..2893562 (+) | 822 | WP_114895999.1 | sensor histidine kinase | - |
| CIB87_RS14770 (CIB87_14730) | - | 2893563..2894204 (+) | 642 | WP_014459245.1 | response regulator transcription factor | - |
| CIB87_RS14775 (CIB87_14735) | - | 2894381..2895367 (+) | 987 | WP_114896000.1 | glycerophosphodiester phosphodiesterase family protein | - |
| CIB87_RS14780 (CIB87_14740) | - | 2895522..2896904 (+) | 1383 | WP_114896001.1 | PepSY domain-containing protein | - |
| CIB87_RS14785 (CIB87_14745) | - | 2896934..2897398 (+) | 465 | WP_114896002.1 | FixH family protein | - |
| CIB87_RS14790 (CIB87_14750) | nucA/comI | 2897539..2897961 (+) | 423 | WP_013083984.1 | NucA/NucB deoxyribonuclease domain-containing protein | Machinery gene |
| CIB87_RS14795 (CIB87_14755) | - | 2898116..2898469 (+) | 354 | WP_249276190.1 | DUF1516 family protein | - |
| CIB87_RS14800 (CIB87_14760) | - | 2898510..2899100 (-) | 591 | WP_114896003.1 | hypothetical protein | - |
| CIB87_RS14805 (CIB87_14765) | - | 2899373..2899858 (-) | 486 | WP_114896004.1 | hypothetical protein | - |
| CIB87_RS14810 (CIB87_14770) | fsa | 2899937..2900605 (-) | 669 | WP_114896005.1 | fructose-6-phosphate aldolase | - |
| CIB87_RS14815 (CIB87_14775) | gnd | 2900654..2901547 (-) | 894 | WP_114896006.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
Sequence
Protein
Download Length: 140 a.a. Molecular weight: 15356.20 Da Isoelectric Point: 4.4990
>NTDB_id=241500 CIB87_RS14790 WP_013083984.1 2897539..2897961(+) (nucA/comI) [Priestia megaterium strain SR7]
MKKIVSGILILVLAVIVMIEGNPLEQNSSTNTSYDEVITFPADRYPETAAHIQHAIDKGKSAVCTIDRDGAEENRRESLK
GIPTKSGYDRDEFPMAFCEEGGNGADIEYVKPSDNRGAGSWISHQVDEFPDGTKVLIEVK
MKKIVSGILILVLAVIVMIEGNPLEQNSSTNTSYDEVITFPADRYPETAAHIQHAIDKGKSAVCTIDRDGAEENRRESLK
GIPTKSGYDRDEFPMAFCEEGGNGADIEYVKPSDNRGAGSWISHQVDEFPDGTKVLIEVK
Nucleotide
Download Length: 423 bp
>NTDB_id=241500 CIB87_RS14790 WP_013083984.1 2897539..2897961(+) (nucA/comI) [Priestia megaterium strain SR7]
TTGAAAAAAATTGTTTCTGGTATTTTAATTTTAGTATTAGCCGTTATTGTTATGATTGAAGGAAATCCGTTAGAGCAGAA
CTCTTCAACGAATACCTCCTACGATGAAGTAATTACCTTCCCTGCTGATCGTTACCCTGAAACTGCAGCGCACATTCAAC
ATGCAATCGATAAAGGAAAATCGGCTGTTTGTACAATCGACCGAGACGGTGCTGAAGAAAACCGCCGTGAATCTTTAAAA
GGCATTCCGACTAAAAGCGGCTACGATCGAGATGAGTTTCCGATGGCCTTTTGTGAAGAAGGCGGAAACGGTGCAGATAT
TGAATATGTAAAGCCTTCAGACAACCGAGGCGCCGGGTCTTGGATCTCACATCAAGTGGACGAGTTTCCAGACGGCACGA
AGGTTTTAATTGAAGTGAAATAA
TTGAAAAAAATTGTTTCTGGTATTTTAATTTTAGTATTAGCCGTTATTGTTATGATTGAAGGAAATCCGTTAGAGCAGAA
CTCTTCAACGAATACCTCCTACGATGAAGTAATTACCTTCCCTGCTGATCGTTACCCTGAAACTGCAGCGCACATTCAAC
ATGCAATCGATAAAGGAAAATCGGCTGTTTGTACAATCGACCGAGACGGTGCTGAAGAAAACCGCCGTGAATCTTTAAAA
GGCATTCCGACTAAAAGCGGCTACGATCGAGATGAGTTTCCGATGGCCTTTTGTGAAGAAGGCGGAAACGGTGCAGATAT
TGAATATGTAAAGCCTTCAGACAACCGAGGCGCCGGGTCTTGGATCTCACATCAAGTGGACGAGTTTCCAGACGGCACGA
AGGTTTTAATTGAAGTGAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
61.207 |
82.857 |
0.507 |