Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   CIB87_RS00605 Genome accession   NZ_CP022674
Coordinates   113571..113765 (+) Length   64 a.a.
NCBI ID   WP_013081746.1    Uniprot ID   A0A8D3X5H5
Organism   Priestia megaterium strain SR7     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 108571..118765
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CIB87_RS00580 (CIB87_00580) galT 108635..110158 (+) 1524 WP_114894176.1 UDP-glucose--hexose-1-phosphate uridylyltransferase -
  CIB87_RS00585 (CIB87_00585) - 110201..111085 (-) 885 WP_114894177.1 NAD(P)-dependent oxidoreductase -
  CIB87_RS00590 (CIB87_00590) - 111289..111477 (-) 189 WP_013055400.1 YjzD family protein -
  CIB87_RS00595 (CIB87_00595) - 111687..112427 (+) 741 WP_013055401.1 hypothetical protein -
  CIB87_RS00600 (CIB87_00600) - 112609..113493 (+) 885 WP_114894178.1 NAD(P)-dependent oxidoreductase -
  CIB87_RS00605 (CIB87_00605) comZ 113571..113765 (+) 195 WP_013081746.1 ComZ family protein Regulator
  CIB87_RS00610 (CIB87_00610) - 113794..113994 (-) 201 WP_045291919.1 hypothetical protein -
  CIB87_RS00615 (CIB87_00615) - 114251..115189 (+) 939 WP_013081747.1 beta-ketoacyl-ACP synthase III -
  CIB87_RS00620 (CIB87_00620) fabF 115229..116470 (+) 1242 WP_013055405.1 beta-ketoacyl-ACP synthase II -
  CIB87_RS00625 (CIB87_00625) - 116577..117350 (+) 774 WP_114894179.1 DUF2268 domain-containing protein -
  CIB87_RS00630 (CIB87_00630) - 117578..118600 (+) 1023 WP_071276851.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7357.39 Da        Isoelectric Point: 3.9484

>NTDB_id=241481 CIB87_RS00605 WP_013081746.1 113571..113765(+) (comZ) [Priestia megaterium strain SR7]
MEEQNMQFMQIAMKYLPEAKQILDETGVELSMEHVQPVLTLLTKVMNDAYELGKQDALAENENN

Nucleotide


Download         Length: 195 bp        

>NTDB_id=241481 CIB87_RS00605 WP_013081746.1 113571..113765(+) (comZ) [Priestia megaterium strain SR7]
ATGGAAGAGCAAAATATGCAATTCATGCAAATTGCAATGAAGTACTTGCCAGAAGCAAAGCAGATCTTAGATGAAACAGG
CGTTGAGCTATCAATGGAACACGTACAGCCGGTATTGACATTACTGACAAAAGTAATGAACGACGCCTATGAGCTTGGCA
AGCAAGATGCATTAGCTGAAAATGAAAACAACTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

60

93.75

0.563

Multiple sequence alignment