Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   CHN56_RS21840 Genome accession   NZ_CP022654
Coordinates   1848003..1848167 (-) Length   54 a.a.
NCBI ID   WP_301179044.1    Uniprot ID   -
Organism   Bacillus velezensis strain SCDB 291     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1843003..1853167
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CHN56_RS21840 comS 1848003..1848167 (-) 165 WP_301179044.1 competence protein ComS Regulator
  CHN56_RS21845 srfAB 1848232..1851276 (-) 3045 Protein_1760 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6155.15 Da        Isoelectric Point: 11.3346

>NTDB_id=241354 CHN56_RS21840 WP_301179044.1 1848003..1848167(-) (comS) [Bacillus velezensis strain SCDB 291]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCCKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=241354 CHN56_RS21840 WP_301179044.1 1848003..1848167(-) (comS) [Bacillus velezensis strain SCDB 291]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGCAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-51)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

56.522

85.185

0.481

Multiple sequence alignment