Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   CHN56_RS05275 Genome accession   NZ_CP022654
Coordinates   1116405..1117358 (-) Length   317 a.a.
NCBI ID   WP_070081621.1    Uniprot ID   -
Organism   Bacillus velezensis strain SCDB 291     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1111405..1122358
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CHN56_RS05245 (CHN56_01048) - 1111557..1112543 (-) 987 WP_031378493.1 ABC transporter ATP-binding protein -
  CHN56_RS05250 (CHN56_01049) - 1112717..1113502 (-) 786 WP_012117278.1 DUF2268 domain-containing protein -
  CHN56_RS05255 (CHN56_01050) fabF 1113586..1114824 (-) 1239 WP_003155056.1 beta-ketoacyl-ACP synthase II -
  CHN56_RS05260 (CHN56_01051) - 1114847..1115785 (-) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  CHN56_RS05265 (CHN56_01052) - 1115953..1116171 (+) 219 WP_003155059.1 hypothetical protein -
  CHN56_RS05270 (CHN56_01053) comZ 1116201..1116392 (-) 192 WP_003155061.1 ComZ family protein Regulator
  CHN56_RS05275 (CHN56_01054) med 1116405..1117358 (-) 954 WP_070081621.1 BMP family ABC transporter substrate-binding protein Regulator
  CHN56_RS05280 (CHN56_01055) - 1117448..1118014 (-) 567 WP_094247079.1 hypothetical protein -
  CHN56_RS05285 (CHN56_01056) - 1118097..1118831 (-) 735 WP_070081619.1 hypothetical protein -
  CHN56_RS05295 (CHN56_01057) - 1119092..1119277 (+) 186 WP_032874447.1 YjzD family protein -
  CHN56_RS05300 (CHN56_01058) - 1119314..1119493 (-) 180 WP_003155070.1 YjzC family protein -
  CHN56_RS05305 (CHN56_01059) argF 1119569..1120540 (-) 972 WP_094247080.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35315.92 Da        Isoelectric Point: 4.5594

>NTDB_id=241294 CHN56_RS05275 WP_070081621.1 1116405..1117358(-) (med) [Bacillus velezensis strain SCDB 291]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHDFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=241294 CHN56_RS05275 WP_070081621.1 1116405..1117358(-) (med) [Bacillus velezensis strain SCDB 291]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGTACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTTATGGGAGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTAGGTGTCATCGCCTCCTTTCTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACGACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCGCTGGTGGACA
AAGCGTTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACCAAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.549

100

0.785

Multiple sequence alignment