Detailed information NTG0241285

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SK637_RS09610
• Genome accession: NZ_CP028415
• Coordinates: 1925044..1926141 (+)
• Length: 365 a.a.
• NCBI ID: WP_033689598.1
• Uniprot ID: -
• Organism: Streptococcus mitis strain SK637
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1920044..1931141

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SK637_RS09585 (SK637_01868)	pgsA	1920556..1921101 (-)	546	WP_033689587.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SK637_RS09590 (SK637_01869)	rodZ	1921112..1921942 (-)	831	WP_033689589.1	cytoskeleton protein RodZ	-
SK637_RS09595 (SK637_01870)	yfmH	1921984..1923267 (-)	1284	WP_033689591.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
SK637_RS09600 (SK637_01871)	yfmF	1923264..1924514 (-)	1251	WP_033689593.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
SK637_RS09605 (SK637_01872)	yaaA	1924673..1925041 (+)	369	WP_033689596.1	S4 domain-containing protein YaaA	-
SK637_RS09610 (SK637_01873)	recF	1925044..1926141 (+)	1098	WP_033689598.1	DNA replication/repair protein RecF	Machinery gene
SK637_RS09615 (SK637_01874)	guaB	1926189..1927667 (-)	1479	WP_000073418.1	IMP dehydrogenase	-
SK637_RS09620 (SK637_01875)	trpS	1927818..1928843 (-)	1026	WP_033689600.1	tryptophan--tRNA ligase	-
SK637_RS09625 (SK637_01876)	-	1929049..1930671 (+)	1623	WP_000958772.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41972.23 Da
• Isoelectric Point: 9.2956

>NTDB_id=241285 SK637_RS09610 WP_033689598.1 1925044..1926141(+) (recF) [Streptococcus mitis strain SK637]
MWLQNLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSVRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLIDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVKITDKEDLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISHSIQTFITTTSLEHLQNLPENLSIFTIQGGKVVVNKT

Nucleotide

• Length: 1098 bp

>NTDB_id=241285 SK637_RS09610 WP_033689598.1 1925044..1926141(+) (recF) [Streptococcus mitis strain SK637]
ATGTGGCTACAAAACCTATCTCTCAAAACTTTTCGTAATTACAAAGAGACGAAAATAGACTTTAATCCTAAATTAAATGT
CTTTTTAGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACACGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTTGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTGACAAAAGTTAATCATTTAAAACAAGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTTTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGGTTCGACGGAAAT
TCATTGATATGGAACTTGGACAAATCAAGCCAATCTATTTATCTGACTTAACTAATTATAACCACATCCTAAAACAAAGA
AACACTTATCTAAAATCAGCTCAAAAAATAGATGAAACCTTTCTTTCTGTGTTGGATGATCAGCTAATTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGTCGTAAGAAACATTTTGAACTCTCTAATC
AGATTGAAGAGTTATCAATATCCTATCAATCCTCTGTCAAGATAACTGACAAAGAAGACTTATCAGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGGTCCAGAGATTTATTTAAAAAGAACACTGGCGTCGGTCCTCATCGAGATGATATTTCTTTTTA
TATAAATGGGATGGACGCTAGTTTTGGAAGTCAAGGCCAACATCGTAGTCTCGTCCTCTCTATAAAATTAGCAGAAATCG
AGTTAATGGAAAGTATTACTACAGAATCTCCGATATTATTGCTTGACGATGTTATGAGTGAACTTGACAACACTAGACAA
TTAAAATTATTAGAAACGATTTCTCATTCAATCCAAACCTTTATCACAACAACAAGCTTAGAGCATCTTCAAAATCTACC
AGAAAATCTAAGTATTTTCACTATTCAAGGTGGTAAAGTTGTTGTAAACAAAACTTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-356)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	96.97	99.452	0.964
recF	Bacillus subtilis subsp. subtilis str. 168	46.07	100	0.466