Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BaGK_RS07925 Genome accession   NZ_CP022653
Coordinates   1566503..1566967 (-) Length   154 a.a.
NCBI ID   WP_003327274.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain GQJK17     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1561503..1571967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BaGK_RS07905 (BaGK_07905) - 1561950..1563770 (+) 1821 WP_094231932.1 PAS domain-containing protein -
  BaGK_RS07910 (BaGK_07910) - 1563793..1564962 (-) 1170 WP_088117074.1 aminotransferase A -
  BaGK_RS21780 (BaGK_07915) - 1565168..1565329 (-) 162 WP_003327276.1 hypothetical protein -
  BaGK_RS07920 (BaGK_07920) cheV 1565538..1566449 (+) 912 WP_063637619.1 chemotaxis protein CheV -
  BaGK_RS07925 (BaGK_07925) kre 1566503..1566967 (-) 465 WP_003327274.1 YkyB family protein Regulator
  BaGK_RS07930 (BaGK_07930) - 1567090..1568385 (-) 1296 WP_094231933.1 MFS transporter -
  BaGK_RS07935 (BaGK_07935) - 1568461..1568958 (-) 498 WP_087941879.1 L,D-transpeptidase family protein -
  BaGK_RS07940 (BaGK_07940) - 1569094..1569954 (-) 861 WP_094231934.1 metallophosphoesterase -
  BaGK_RS07945 (BaGK_07945) fadH 1570101..1570865 (+) 765 WP_094231935.1 2,4-dienoyl-CoA reductase -
  BaGK_RS22165 - 1570940..1571076 (+) 137 Protein_1525 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17942.68 Da        Isoelectric Point: 10.4207

>NTDB_id=241229 BaGK_RS07925 WP_003327274.1 1566503..1566967(-) (kre) [Bacillus atrophaeus strain GQJK17]
MDDHAYTKDLRPTIENLSKAVYTVNRHAKTAPNPKYLYTLKKRALQKLVKEGKGKKVGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKNLLQDYVGMKEKPFVTNRQQPTYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=241229 BaGK_RS07925 WP_003327274.1 1566503..1566967(-) (kre) [Bacillus atrophaeus strain GQJK17]
ATGGACGACCATGCATATACGAAAGATCTGCGGCCAACCATCGAAAATCTTTCAAAAGCTGTCTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATACTTTGAAAAAACGGGCTTTACAAAAGCTGGTGAAAGAAGGTAAAG
GAAAGAAAGTAGGGCTTCATTTTTCAAAAAATCCAAGGTTTAGCCAACAGCAATCGGACGTGCTCATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCGAACACCTTCCGCATTTAGGTACGCTAAATCAATCGTACCGGAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAAAACCTTTTGCAAGATTATGTCGGCATGAAAGAAAAACCGTTTGTCA
CAAATCGGCAGCAGCCAACTTACCATAAACCTGTTTTCAAAAAGCTTGGAGAAAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

94.156

100

0.942

Multiple sequence alignment