Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   BaGK_RS06585 Genome accession   NZ_CP022653
Coordinates   1328904..1329560 (+) Length   218 a.a.
NCBI ID   WP_061571227.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain GQJK17     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1323904..1334560
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BaGK_RS06555 (BaGK_06555) oppF 1324124..1325041 (+) 918 WP_035175065.1 oligopeptide ABC transporter ATP-binding protein OppF -
  BaGK_RS21525 - 1325030..1325386 (-) 357 WP_157729138.1 hypothetical protein -
  BaGK_RS06565 (BaGK_06565) - 1325440..1326621 (+) 1182 WP_373422325.1 putative glycoside hydrolase -
  BaGK_RS06570 (BaGK_06570) - 1326772..1327350 (+) 579 WP_003327580.1 GNAT family N-acetyltransferase -
  BaGK_RS06575 (BaGK_06575) spx 1327531..1327926 (+) 396 WP_003327578.1 transcriptional regulator Spx -
  BaGK_RS06580 (BaGK_06580) - 1327962..1328624 (-) 663 WP_003327577.1 TerC family protein -
  BaGK_RS21965 - 1328811..1328921 (+) 111 Protein_1250 adaptor protein MecA -
  BaGK_RS06585 (BaGK_06585) mecA 1328904..1329560 (+) 657 WP_061571227.1 adaptor protein MecA Regulator
  BaGK_RS06590 (BaGK_06590) coiA 1329720..1330883 (+) 1164 WP_094231807.1 competence protein CoiA family protein Machinery gene
  BaGK_RS06595 (BaGK_06595) pepF 1331112..1332941 (+) 1830 WP_167375115.1 oligoendopeptidase F -
  BaGK_RS06600 (BaGK_06600) - 1332977..1333144 (-) 168 WP_003327573.1 hypothetical protein -
  BaGK_RS06605 (BaGK_06605) spxH 1333460..1334362 (-) 903 WP_003327572.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25956.65 Da        Isoelectric Point: 3.9783

>NTDB_id=241223 BaGK_RS06585 WP_061571227.1 1328904..1329560(+) (mecA) [Bacillus atrophaeus strain GQJK17]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEQADENLDALLDDFQKEEQADNQEEKEQKLQFVLRFDDFEDLISLSNLNVNGSKTTLYSFENR
YYLYVDFQEMSDEEVENQLSILLEYTNESSISIHRIEEYGKLIISEDVLDTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=241223 BaGK_RS06585 WP_061571227.1 1328904..1329560(+) (mecA) [Bacillus atrophaeus strain GQJK17]
ATGGAAATAGAAAGAATAAACGAACATACTGTAAAGTTTTATATGTCATATGGAGATATTGAAGACCGCGGTTTCGACAG
AGAAGAGATTTGGTATAACCGTGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTTCATGAGGAAGAAGAAT
TCGCTGTAGAAGGTCCTCTTTGGATTCAAGTTCAGGCACTCGATAAAGGCTTGGAGATTATCGTTACAAAAGCCCAGCTT
TCTAAAGACGGACAAAAGCTCGAACTGCCGATACCTGAAGATAAAAAGCAAGAACAAGCAGATGAGAATCTCGATGCCTT
GCTGGATGATTTTCAAAAAGAAGAGCAAGCCGACAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTCGTCTTGCGGTTTG
ATGATTTTGAGGACTTGATTTCTCTTTCAAATTTGAACGTAAACGGAAGCAAAACGACGCTTTATTCGTTTGAAAACCGG
TATTATTTATATGTAGATTTTCAAGAAATGTCTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTAGAGTACACAAA
TGAATCCTCAATCAGCATACACCGCATCGAAGAATACGGCAAGCTGATTATTTCAGAGGATGTTCTGGATACAATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

92.661

100

0.927

Multiple sequence alignment