Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   BaGK_RS06470 Genome accession   NZ_CP022653
Coordinates   1306199..1307152 (+) Length   317 a.a.
NCBI ID   WP_010788227.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain GQJK17     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1301199..1312152
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BaGK_RS06445 (BaGK_06445) argF 1303003..1303973 (+) 971 Protein_1222 ornithine carbamoyltransferase -
  BaGK_RS06450 (BaGK_06450) - 1304055..1304234 (+) 180 WP_003327605.1 YjzC family protein -
  BaGK_RS06455 (BaGK_06455) - 1304264..1304452 (-) 189 WP_003327604.1 YjzD family protein -
  BaGK_RS06460 (BaGK_06460) - 1304712..1305446 (+) 735 WP_063637420.1 hypothetical protein -
  BaGK_RS06465 (BaGK_06465) - 1305534..1306109 (+) 576 WP_094231799.1 hypothetical protein -
  BaGK_RS06470 (BaGK_06470) med 1306199..1307152 (+) 954 WP_010788227.1 BMP family ABC transporter substrate-binding protein Regulator
  BaGK_RS06475 (BaGK_06475) comZ 1307167..1307358 (+) 192 WP_010788228.1 ComZ family protein Regulator
  BaGK_RS06480 (BaGK_06480) - 1307388..1307615 (-) 228 WP_003327598.1 hypothetical protein -
  BaGK_RS06485 (BaGK_06485) fabH 1307787..1308725 (+) 939 WP_003327597.1 beta-ketoacyl-ACP synthase III -
  BaGK_RS06490 (BaGK_06490) fabF 1308747..1309985 (+) 1239 WP_094231800.1 beta-ketoacyl-ACP synthase II -
  BaGK_RS06495 (BaGK_06495) - 1310063..1310848 (+) 786 WP_094231801.1 DUF2268 domain-containing protein -
  BaGK_RS06500 (BaGK_06500) - 1311040..1312026 (+) 987 WP_010788232.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35410.91 Da        Isoelectric Point: 4.4404

>NTDB_id=241219 BaGK_RS06470 WP_010788227.1 1306199..1307152(+) (med) [Bacillus atrophaeus strain GQJK17]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLSIQSAYNVDVYYKEGVKTDEDILNAIED
YHKRGINLLFGHGSEYEEMFNLVSEDYPDMEFVISNAESKADNVTSVHLNGEAMGFFGGMTAAHMSKTNQIGVIASFKWQ
PEVDGFIKGAKYENPDITINTKYTDHWDDDTTAVKLYEKIKEEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYGIIAEQYSNGILESGDHYFDFKDHVVEMGTFSPLVDKAFQDKIAALIKTYNRTDELPKKE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=241219 BaGK_RS06470 WP_010788227.1 1306199..1307152(+) (med) [Bacillus atrophaeus strain GQJK17]
ATGATCACTAGGCTTGTCATGATCTTTTCTGTCCTCCTGTTACTGAGCGGATGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGTATGCTCTTTCCCGATACCATCAATGATCTAGTGTGGGGAACAAAAGGGTATAAAGGTTTACTAAGTA
TACAATCTGCATATAATGTCGACGTCTATTATAAAGAAGGCGTTAAGACTGATGAGGATATATTAAACGCCATTGAAGAT
TACCACAAGAGAGGGATAAACCTTCTTTTTGGCCATGGCAGTGAATACGAAGAAATGTTTAATCTGGTCAGTGAGGATTA
CCCGGACATGGAATTTGTCATCTCTAACGCGGAATCAAAAGCCGACAACGTCACAAGCGTTCATCTTAACGGAGAAGCGA
TGGGGTTTTTCGGCGGGATGACAGCCGCACATATGTCCAAAACCAATCAAATCGGCGTGATTGCTTCTTTTAAATGGCAG
CCTGAAGTAGACGGCTTCATCAAAGGGGCCAAGTATGAAAATCCGGACATCACTATCAATACGAAATATACAGACCACTG
GGATGACGATACCACAGCCGTGAAGCTTTATGAGAAGATAAAAGAGGAAGGCGCGGATGTTGTATATCCCGCCGGAGATG
GGTATAATGTTCCTGTCATTCAACAAATTAAAAAAGACGGTCTCTATGCGATCGGCTATGTCACAGACCAGTCTGATCTG
GGCGAAAATACCGTTTTGACAAGCACTGTTCAAAATGTGGACAAGGCCTATGGCATCATAGCCGAGCAATACAGCAACGG
CATTTTGGAAAGCGGAGATCACTATTTCGATTTTAAAGATCATGTCGTTGAAATGGGGACATTCAGTCCTCTTGTTGACA
AAGCCTTCCAAGATAAAATTGCCGCTCTTATCAAAACGTATAATCGAACAGATGAACTGCCGAAAAAAGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

87.382

100

0.874

Multiple sequence alignment