Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   BLI_RS21475 Genome accession   NC_006322
Coordinates   4211584..4212432 (-) Length   282 a.a.
NCBI ID   WP_003178034.1    Uniprot ID   Q65CN8
Organism   Bacillus licheniformis DSM 13 = ATCC 14580     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 4206584..4217432
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLI_RS21435 (BLi04361) rpsR 4206789..4207028 (-) 240 WP_003178022.1 30S ribosomal protein S18 -
  BLI_RS21440 (BLi04362) ssbA 4207080..4207592 (-) 513 WP_003178024.1 single-stranded DNA-binding protein SsbA Machinery gene
  BLI_RS21445 (BLi04363) rpsF 4207639..4207926 (-) 288 WP_003178026.1 30S ribosomal protein S6 -
  BLI_RS21450 (BLi04364) ychF 4208040..4209140 (-) 1101 WP_003178027.1 redox-regulated ATPase YchF -
  BLI_RS21460 (BLi04365) - 4209319..4209525 (-) 207 WP_011201785.1 DUF951 domain-containing protein -
  BLI_RS21465 (BLi04366) - 4209613..4210626 (-) 1014 WP_003178030.1 hypothetical protein -
  BLI_RS21470 (BLi04367) yyaC 4210930..4211547 (+) 618 WP_003178032.1 spore protease YyaC -
  BLI_RS21475 (BLi04368) spo0J 4211584..4212432 (-) 849 WP_003178034.1 ParB/RepB/Spo0J family partition protein Regulator
  BLI_RS21480 (BLi04369) soj 4212425..4213186 (-) 762 WP_011201786.1 sporulation initiation inhibitor protein Soj -
  BLI_RS21485 (BLi04370) - 4213429..4213872 (-) 444 WP_003178038.1 carboxymuconolactone decarboxylase family protein -
  BLI_RS21490 (BLi04371) - 4213939..4214796 (-) 858 WP_003178040.1 RNA polymerase sigma-70 factor -
  BLI_RS21495 (BLi04372) noc 4214852..4215703 (-) 852 WP_003178042.1 nucleoid occlusion protein -
  BLI_RS21500 (BLi04373) rsmG 4215801..4216520 (-) 720 WP_003178044.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence


Protein


Download         Length: 282 a.a.        Molecular weight: 32283.41 Da        Isoelectric Point: 9.5628

>NTDB_id=24121 BLI_RS21475 WP_003178034.1 4211584..4212432(-) (spo0J) [Bacillus licheniformis DSM 13 = ATCC 14580]
MPKGLGKGINALFSNVDLSEETVEEIKLQDLRPNPYQPRKTFDDQSLKDLKESILQHGVLQPIIVRKSIKGYDIVAGERR
FRAAEKAGLETIPAIVRELSESLMMEIALLENLQREDLSPLEEAKAYESLLKHLDMTQEQLAKRLGKSRPHIANHLRLLT
LPEDVQKLIDNGTLSMGHGRTLLGLKNKKKLEPLVQKVVSEQLNVRQLEKLIQQLNADVPRETKKPKQVKDAVIKERESY
LRNYFGTPVTIKKQKKKGRIEIEFYSNEDLERILELLAQEDA

Nucleotide


Download         Length: 849 bp        

>NTDB_id=24121 BLI_RS21475 WP_003178034.1 4211584..4212432(-) (spo0J) [Bacillus licheniformis DSM 13 = ATCC 14580]
ATGCCTAAAGGTCTCGGAAAAGGGATTAATGCATTGTTTTCAAATGTTGATTTATCCGAAGAAACGGTTGAGGAAATCAA
GCTGCAAGACTTGCGGCCCAACCCTTATCAGCCAAGAAAAACGTTTGATGACCAATCGTTAAAAGATTTGAAGGAGTCCA
TTTTGCAGCACGGTGTTTTGCAGCCCATCATCGTCAGAAAGTCAATTAAAGGCTATGACATTGTGGCCGGAGAACGCCGT
TTCCGGGCTGCTGAAAAGGCCGGATTGGAAACCATTCCTGCGATTGTGCGCGAGCTGTCGGAATCCCTGATGATGGAGAT
TGCCCTATTGGAAAATCTTCAACGAGAAGACCTGTCTCCGCTTGAAGAAGCAAAAGCCTATGAATCTTTGCTCAAACATC
TCGATATGACCCAGGAACAGCTGGCGAAAAGGCTTGGAAAAAGCAGGCCTCACATCGCCAACCACTTGCGGCTGCTGACA
CTTCCTGAAGACGTTCAAAAGTTAATCGACAACGGCACGTTATCGATGGGCCATGGCCGAACATTGCTTGGATTGAAAAA
CAAGAAAAAGCTTGAGCCGCTTGTTCAAAAGGTCGTGTCCGAACAGTTGAACGTCCGCCAGTTGGAAAAGTTAATTCAAC
AGTTGAACGCTGATGTTCCACGTGAAACAAAGAAGCCGAAACAAGTCAAAGATGCAGTGATCAAGGAACGGGAATCGTAT
TTGCGAAACTATTTTGGAACACCGGTGACCATTAAAAAGCAAAAGAAAAAAGGCAGGATCGAAATCGAATTCTACTCAAA
TGAAGACTTGGAGCGTATTCTCGAATTATTGGCTCAAGAAGACGCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q65CN8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

43.462

92.199

0.401


Multiple sequence alignment