Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   Sp14A_RS08975 Genome accession   NZ_CP022601
Coordinates   1747421..1748140 (-) Length   239 a.a.
NCBI ID   WP_115130748.1    Uniprot ID   A0A345VLZ4
Organism   Streptococcus pluranimalium strain 14A0014     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1742421..1753140
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Sp14A_RS08945 (Sp14A_18500) rimP 1743584..1744057 (-) 474 WP_115131190.1 ribosome maturation factor RimP -
  Sp14A_RS08950 (Sp14A_18510) - 1744186..1744632 (-) 447 WP_115130745.1 pyridoxamine 5'-phosphate oxidase family protein -
  Sp14A_RS08960 (Sp14A_18530) trmB 1744912..1745547 (-) 636 WP_115130746.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  Sp14A_RS08965 (Sp14A_18540) - 1745544..1746329 (-) 786 WP_115131191.1 phosphotransferase family protein -
  Sp14A_RS08970 (Sp14A_18550) - 1746385..1747419 (-) 1035 WP_115130747.1 ABC transporter permease -
  Sp14A_RS08975 (Sp14A_18560) pptA 1747421..1748140 (-) 720 WP_115130748.1 ABC transporter ATP-binding protein Regulator
  Sp14A_RS08980 (Sp14A_18570) - 1748211..1748627 (+) 417 WP_104968415.1 HIT family protein -
  Sp14A_RS08985 (Sp14A_18580) - 1748627..1748929 (+) 303 WP_115130749.1 hypothetical protein -
  Sp14A_RS08990 (Sp14A_18590) - 1749073..1751505 (-) 2433 WP_115130750.1 GBS Bsp-like repeat-containing protein -
  Sp14A_RS08995 (Sp14A_18600) trmL 1751586..1752122 (-) 537 WP_162797802.1 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL -

Sequence

Protein


Download         Length: 239 a.a.        Molecular weight: 26730.97 Da        Isoelectric Point: 4.4763

>NTDB_id=241073 Sp14A_RS08975 WP_115130748.1 1747421..1748140(-) (pptA) [Streptococcus pluranimalium strain 14A0014]
MLKIDHLVGGYVNIPVLKDISFEVSSGEVVGLIGLNGAGKSTTISEIIGLLQPYQGSVTLDGLQLLENPESYRRKIGYIP
ETPILYEELTLQEHLDTVALAYGLGEQQELRQKLLQLFRLEDKLDWYPIHFSKGMKQKVMIIAALMIEPSLLIVDEPFLG
LDPLAIRDLTNIIAEEKTKGTAVLMSTHVLDSAEKMCDRFVILHHGEILANGSLEELRQQFSLPTADLTDIYMQLTQEN

Nucleotide


Download         Length: 720 bp        

>NTDB_id=241073 Sp14A_RS08975 WP_115130748.1 1747421..1748140(-) (pptA) [Streptococcus pluranimalium strain 14A0014]
ATGCTAAAAATTGATCATTTAGTTGGTGGCTACGTTAATATACCTGTTTTAAAGGACATTTCTTTTGAGGTTTCCTCAGG
AGAAGTTGTTGGCTTAATTGGGCTTAACGGAGCAGGGAAATCAACGACTATCAGTGAAATCATTGGACTTTTGCAACCTT
ATCAGGGAAGTGTGACTTTGGATGGCTTGCAATTGTTAGAAAATCCAGAAAGTTACCGTCGCAAAATAGGTTATATCCCT
GAGACGCCAATATTATATGAAGAGTTGACCTTACAAGAACATTTGGATACAGTTGCGTTAGCTTATGGTTTAGGTGAGCA
GCAGGAATTACGACAAAAGCTGTTACAACTCTTTCGTTTAGAGGATAAATTAGACTGGTATCCCATTCATTTTTCAAAAG
GGATGAAGCAGAAAGTAATGATTATTGCAGCTCTCATGATTGAGCCAAGCTTATTGATTGTGGATGAGCCTTTTTTGGGA
TTGGATCCTTTAGCGATTAGGGATTTGACCAATATCATTGCAGAGGAAAAAACTAAAGGAACAGCTGTTTTGATGAGTAC
TCATGTTCTGGATTCTGCTGAAAAAATGTGTGACCGTTTTGTCATTCTCCATCATGGTGAGATTCTAGCTAACGGTAGTC
TAGAAGAGTTACGACAACAATTTAGTCTACCAACAGCTGATTTGACTGATATTTATATGCAATTGACGCAGGAGAATTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-158)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A345VLZ4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

69.456

100

0.695
  pptA Streptococcus thermophilus LMD-9

68.619

100

0.686

Multiple sequence alignment