Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EBN1_RS04860 Genome accession   NC_006513
Coordinates   1017244..1017630 (+) Length   128 a.a.
NCBI ID   WP_011236794.1    Uniprot ID   -
Organism   Aromatoleum aromaticum EbN1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1012244..1022630
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EBN1_RS04835 (EB_RS04790) mgtE 1012477..1013919 (+) 1443 WP_041645814.1 magnesium transporter -
  EBN1_RS04840 (EB_RS04795) hemL 1014055..1015338 (-) 1284 WP_011236790.1 glutamate-1-semialdehyde 2,1-aminomutase -
  EBN1_RS04845 (EB_RS04800) thiE 1015386..1016012 (-) 627 WP_011236791.1 thiamine phosphate synthase -
  EBN1_RS04850 (EB_RS04805) - 1016005..1016886 (-) 882 WP_011236792.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  EBN1_RS04855 (EB_RS04810) - 1017004..1017174 (+) 171 WP_041646939.1 rubredoxin -
  EBN1_RS04860 (EB_RS04815) pilG 1017244..1017630 (+) 387 WP_011236794.1 response regulator Regulator
  EBN1_RS04865 (EB_RS04820) - 1017654..1018019 (+) 366 WP_011236795.1 response regulator -
  EBN1_RS04870 (EB_RS04825) - 1018025..1018540 (+) 516 WP_011236796.1 chemotaxis protein CheW -
  EBN1_RS04875 (EB_RS04830) - 1018592..1020733 (+) 2142 WP_011236797.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14136.35 Da        Isoelectric Point: 7.3231

>NTDB_id=24105 EBN1_RS04860 WP_011236794.1 1017244..1017630(+) (pilG) [Aromatoleum aromaticum EbN1]
MDLTGIRVMVIDDSNTIRRSAEIFLTHSGCEVLLAEDGFDALAKIADHRPHVIFVDIMMPRLDGYQTCALIKKNPRLSAT
PVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLKAAAAHASRTTD

Nucleotide


Download         Length: 387 bp        

>NTDB_id=24105 EBN1_RS04860 WP_011236794.1 1017244..1017630(+) (pilG) [Aromatoleum aromaticum EbN1]
ATGGATCTGACCGGAATCAGGGTGATGGTGATCGACGACAGCAACACCATCCGGCGCAGCGCCGAGATCTTTCTGACCCA
CTCGGGCTGCGAGGTGCTCCTCGCCGAGGACGGCTTCGATGCGCTGGCGAAAATCGCCGACCATCGCCCTCATGTCATTT
TCGTCGACATCATGATGCCGCGTCTCGACGGCTACCAGACCTGCGCGCTGATCAAGAAGAACCCGCGGCTTTCGGCGACG
CCGGTGATCATGCTGTCGTCGAAGGACGGGCTGTTCGACCGCGCCCGCGGCCGCATGGTCGGCTCGGACGAATATCTCAC
CAAGCCGTTCACGAAGGACAGCCTGCTCAAGGCGGCAGCTGCTCACGCCAGCCGCACCACAGACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(8-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

66.393

95.313

0.633

Multiple sequence alignment