Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   Sp14A_RS03300 Genome accession   NZ_CP022601
Coordinates   616969..618771 (+) Length   600 a.a.
NCBI ID   WP_115129902.1    Uniprot ID   A0A345VIR8
Organism   Streptococcus pluranimalium strain 14A0014     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 611969..623771
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Sp14A_RS03275 (Sp14A_06870) queA 612210..613256 (-) 1047 WP_115129898.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  Sp14A_RS03280 (Sp14A_06880) - 613426..614130 (+) 705 WP_115129899.1 glucosamine-6-phosphate deaminase -
  Sp14A_RS03285 (Sp14A_06890) - 614176..615132 (-) 957 WP_115129900.1 glutathione S-transferase family protein -
  Sp14A_RS03290 (Sp14A_06900) - 615237..615950 (+) 714 WP_115131145.1 pseudouridine synthase -
  Sp14A_RS03295 (Sp14A_06910) - 616010..616972 (+) 963 WP_115129901.1 competence protein CoiA family protein -
  Sp14A_RS03300 (Sp14A_06920) pepF 616969..618771 (+) 1803 WP_115129902.1 oligoendopeptidase F Regulator
  Sp14A_RS03305 (Sp14A_06930) - 618799..619215 (+) 417 WP_240314779.1 hypothetical protein -
  Sp14A_RS03310 (Sp14A_06940) - 619419..619964 (+) 546 WP_115129903.1 GNAT family N-acetyltransferase -
  Sp14A_RS03315 (Sp14A_06950) - 619961..620575 (+) 615 WP_115129904.1 HAD-IA family hydrolase -
  Sp14A_RS03320 (Sp14A_06960) - 620685..621896 (+) 1212 WP_115129905.1 OFA family MFS transporter -
  Sp14A_RS03325 (Sp14A_06970) - 622694..623401 (+) 708 WP_115131147.1 O-methyltransferase -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 68938.56 Da        Isoelectric Point: 4.5088

>NTDB_id=241048 Sp14A_RS03300 WP_115129902.1 616969..618771(+) (pepF) [Streptococcus pluranimalium strain 14A0014]
MTNNRSHLKEEETWDLSTIFETDQAWEVERQALENDLKASQNDAGHLLDSAKSLLDITENALALMRRLETLYVYASMKND
QDTTIAVYQEMEAKATALSSLYSQTFAFYEPEFLAITKEQLENYKGEEPGLLAYGHYFEKLLAAKDHVLSQEAEELLAGA
SEIFGSAAETFSIFDNADVTYPWVTNDEGELVELTHGNFISLMESKNRDVRKGAYEAYYGVYEQFQHTYAKTLQTNVKVH
NYKAKVRGYESARQAALSANFIPESAYDTLLAVVNKHLPLLHRYMKLRQELLGLDDLKMYDVYTPLSEHDMAITYPEALE
KSRQVLTVFGKDYSDRVDRAFSERWIDVHVNKGKRSGAYSGGSYDTNAFMLLNWQDTLDNLYTLIHETGHSLHSTFTREN
QPYVYGDYSIFLAEIASTTNENILTETLLEEVTDDKERFAILNHYLDGFKGTIFRQTQFAEFELAIHQADQEGQVLTSDF
LNKTYADLNEKYYGLSAEDNHEIQFEWARIPHFYYNFYVYQYATGFAAASYLADRIVHGTDKDRDNYLDYLKAGNSDYPL
NVIAKAGVDMTSADYLEGAFKVFEERLEELENLVTKLSHR

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=241048 Sp14A_RS03300 WP_115129902.1 616969..618771(+) (pepF) [Streptococcus pluranimalium strain 14A0014]
ATGACAAATAACCGTAGCCATCTGAAGGAAGAAGAAACTTGGGATTTAAGCACTATTTTTGAGACAGATCAAGCTTGGGA
AGTGGAACGTCAGGCCTTAGAAAACGATTTGAAAGCTTCTCAAAATGATGCGGGGCACCTTTTGGATTCAGCTAAAAGCT
TGTTGGATATTACGGAAAATGCTTTAGCTTTGATGCGTCGTTTAGAGACATTATACGTCTATGCTTCCATGAAAAATGAC
CAAGATACGACAATCGCAGTTTATCAAGAGATGGAAGCCAAGGCGACGGCCTTATCATCTCTTTATAGTCAGACTTTTGC
CTTTTATGAGCCAGAGTTTTTGGCTATCACTAAAGAACAGTTGGAAAACTATAAAGGTGAAGAGCCAGGCCTTCTTGCTT
ATGGCCATTATTTTGAAAAATTGTTGGCAGCTAAAGACCATGTCCTATCGCAGGAAGCAGAAGAGTTGTTAGCTGGTGCT
TCTGAAATTTTTGGTTCAGCAGCTGAAACCTTCTCTATTTTTGATAATGCTGATGTCACCTATCCTTGGGTAACCAATGA
TGAGGGAGAATTGGTCGAATTAACCCACGGTAACTTTATCAGCCTTATGGAATCTAAAAATCGTGACGTTCGTAAGGGTG
CCTATGAAGCCTATTATGGTGTTTATGAGCAGTTTCAGCATACTTATGCTAAAACCCTTCAAACCAACGTTAAGGTGCAT
AATTACAAGGCTAAAGTGCGTGGCTATGAGTCTGCTCGCCAAGCTGCTCTTTCAGCAAACTTTATTCCTGAGTCTGCCTA
TGACACTTTGTTAGCTGTTGTCAATAAGCATTTACCGCTACTGCATCGCTATATGAAATTGCGTCAGGAGCTATTAGGAC
TGGATGACCTCAAAATGTATGATGTCTACACGCCACTTTCAGAGCATGATATGGCGATTACTTATCCAGAAGCTCTTGAA
AAATCACGTCAAGTGTTAACGGTATTTGGTAAAGATTATAGCGACCGCGTTGACCGTGCTTTCTCAGAGCGTTGGATTGA
TGTACATGTTAATAAAGGGAAACGTTCGGGTGCCTATTCAGGCGGTTCTTACGATACCAATGCCTTTATGTTGCTCAATT
GGCAAGATACTTTAGACAATCTATACACCCTTATTCATGAGACAGGCCATAGTCTACATTCGACCTTTACACGTGAGAAT
CAGCCGTATGTTTATGGGGATTATAGCATTTTCTTAGCTGAAATTGCCTCAACGACCAATGAAAATATTTTGACCGAAAC
CCTCTTAGAAGAAGTGACTGATGATAAAGAACGTTTTGCTATCCTTAATCATTATTTGGATGGTTTTAAAGGAACAATCT
TCCGTCAAACACAATTCGCTGAGTTTGAACTAGCTATCCACCAAGCTGATCAAGAAGGGCAAGTCTTGACTAGCGACTTC
CTCAATAAGACTTATGCTGATTTGAATGAGAAGTATTATGGCTTATCAGCTGAGGACAATCATGAGATTCAGTTTGAATG
GGCTCGTATCCCACATTTCTACTATAATTTCTACGTTTATCAATACGCGACAGGGTTTGCGGCTGCTTCTTATCTAGCAG
ATCGTATTGTTCATGGAACAGACAAAGACCGTGATAACTACTTAGACTATCTCAAAGCTGGTAATTCAGACTATCCACTT
AATGTCATTGCCAAAGCAGGTGTTGATATGACTAGTGCTGATTACCTTGAAGGGGCCTTCAAAGTCTTTGAAGAACGCTT
AGAAGAATTGGAAAACTTAGTTACCAAGCTCAGCCACCGTTAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(202-580)

Oligopeptidase F (Peptidase_M3_N)

(112-180)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A345VIR8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

71.786

99.833

0.717

Multiple sequence alignment