Detailed information NTG0024104

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: EBN1_RS03890
• Genome accession: NC_006513
• Coordinates: 814534..815694 (-)
• Length: 386 a.a.
• NCBI ID: WP_011236605.1
• Uniprot ID: Q5P734
• Organism: Aromatoleum aromaticum EbN1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 809534..820694

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EBN1_RS03860 (EB_RS03820)	maiA	810047..810709 (+)	663	WP_011236600.1	maleylacetoacetate isomerase	-
EBN1_RS03865	-	810804..811037 (-)	234	Protein_751	LysR substrate-binding domain-containing protein	-
EBN1_RS03870	-	811183..811782 (-)	600	Protein_752	LysR family transcriptional regulator	-
EBN1_RS03875 (EB_RS03830)	-	811739..812935 (+)	1197	WP_011236602.1	YbfB/YjiJ family MFS transporter	-
EBN1_RS03880 (EB_RS03835)	ftsX	812976..813878 (-)	903	WP_011236603.1	permease-like cell division protein FtsX	-
EBN1_RS03885 (EB_RS03840)	-	813875..814537 (-)	663	WP_011236604.1	ATP-binding cassette domain-containing protein	-
EBN1_RS03890 (EB_RS03845)	pilA	814534..815694 (-)	1161	WP_011236605.1	signal recognition particle-docking protein FtsY	Machinery gene
EBN1_RS03895 (EB_RS03850)	-	815835..817208 (+)	1374	WP_011236606.1	pitrilysin family protein	-
EBN1_RS03900 (EB_RS03855)	-	817210..818592 (+)	1383	WP_011236607.1	pitrilysin family protein	-
EBN1_RS03905 (EB_RS03860)	rsmD	818589..819128 (+)	540	WP_011236608.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
EBN1_RS03910 (EB_RS03865)	coaD	819125..819616 (+)	492	WP_011236609.1	pantetheine-phosphate adenylyltransferase	-
EBN1_RS03915 (EB_RS03870)	-	819631..819885 (+)	255	WP_041645708.1	YfhL family 4Fe-4S dicluster ferredoxin	-

Sequence

Protein

• Length: 386 a.a.
• Molecular weight: 41042.93 Da
• Isoelectric Point: 5.2044

>NTDB_id=24104 EBN1_RS03890 WP_011236605.1 814534..815694(-) (pilA) [Aromatoleum aromaticum EbN1]
MFGFLRKKPAKPDAVEDKAQPDEIPAAEPALDQAEPVAEAVQPAPPAEVGPDLEASLEAPFETPVPLGAEIAKPGAKRSW
SERLKAGLSRTRQQLGGGLASLFGRRKIDEELLEELEATLLMADCGVEATQHLLGELRKRWKRDRLETADQLQKALADEL
HAILLPLEEPLDVSGHSPYIIMIAGVNGSGKTTSIGKLAKYFQAQGRSVLLAAGDTFRAAAREQLMTWGERNNVTVIAQD
GGDSAAVIFDAINAAKARRIDVVLADTAGRLPTQLHLMDEIAKVKRVIAKASPSGPHEVLLVLDANIGQNALAQVKAFDS
AIGVTGLVVTKLDGTAKGGVVAAIARQYPRPLRFIGVGEGIDDLQPFKAREFVDALFDTNGAGSAA

Nucleotide

• Length: 1161 bp

>NTDB_id=24104 EBN1_RS03890 WP_011236605.1 814534..815694(-) (pilA) [Aromatoleum aromaticum EbN1]
ATGTTTGGTTTCCTGAGAAAAAAGCCCGCGAAGCCCGATGCAGTGGAAGACAAGGCGCAGCCGGACGAGATCCCGGCCGC
GGAGCCTGCGCTCGATCAGGCCGAACCGGTCGCCGAAGCGGTGCAGCCGGCACCTCCTGCCGAGGTCGGTCCCGATCTTG
AAGCTTCCCTCGAAGCTCCTTTTGAAACTCCCGTTCCGCTCGGCGCGGAGATCGCGAAGCCGGGCGCGAAACGTTCGTGG
TCCGAGCGGCTCAAGGCGGGACTCAGCCGCACCCGTCAGCAGCTTGGCGGGGGGCTCGCGAGCCTTTTCGGCCGGCGCAA
GATCGACGAGGAACTGCTCGAGGAGCTCGAAGCGACGCTGCTGATGGCCGACTGCGGCGTCGAGGCGACGCAGCACCTGC
TCGGCGAACTGCGCAAGCGCTGGAAGCGCGACCGGCTCGAGACTGCCGACCAGCTGCAGAAGGCGCTCGCCGACGAGCTG
CACGCGATCCTGCTGCCGCTCGAGGAACCGCTCGACGTGTCCGGCCACAGCCCCTACATCATCATGATCGCCGGCGTGAA
CGGCTCGGGCAAGACGACTTCGATCGGCAAGCTCGCGAAATATTTCCAGGCGCAGGGCAGGAGCGTGCTGCTCGCCGCCG
GCGACACGTTCCGCGCCGCGGCGCGCGAACAGCTGATGACGTGGGGCGAGCGCAACAACGTCACGGTCATCGCGCAGGAC
GGGGGCGACTCGGCGGCGGTGATCTTCGACGCGATCAACGCGGCCAAGGCACGCCGCATCGATGTCGTGCTCGCCGATAC
TGCGGGCCGGCTGCCGACGCAGCTGCACCTGATGGACGAGATCGCGAAAGTCAAACGGGTCATCGCGAAAGCTTCCCCGA
GCGGGCCGCACGAAGTGCTGCTCGTTCTCGACGCCAACATCGGCCAGAACGCGCTGGCGCAGGTGAAGGCTTTCGACAGC
GCGATCGGCGTCACCGGCCTCGTCGTCACGAAGCTCGACGGCACTGCGAAAGGCGGTGTCGTCGCGGCGATCGCACGCCA
GTACCCGCGGCCGCTGCGCTTCATCGGCGTCGGCGAAGGAATCGACGACCTGCAGCCGTTCAAGGCGCGCGAGTTCGTCG
ACGCGCTGTTCGACACGAATGGAGCCGGCAGCGCGGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (179-377)

• SRP54-type protein, helical bundle domain (SRP54_N) (95-160)

3D structure

• AlphaFold DB: Q5P734

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	51.799	100	0.56