Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   CHR53_RS08175 Genome accession   NZ_CP022572
Coordinates   1695204..1695392 (+) Length   62 a.a.
NCBI ID   WP_066394970.1    Uniprot ID   A0A3T0HVV9
Organism   Neobacillus mesonae strain H20-5     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1690204..1700392
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CHR53_RS08155 (CHR53_08190) - 1692076..1692258 (-) 183 WP_066394954.1 YjzD family protein -
  CHR53_RS08160 (CHR53_08195) - 1692426..1693148 (+) 723 WP_127486109.1 hydrolase -
  CHR53_RS08165 (CHR53_08200) - 1693227..1694054 (+) 828 WP_127486111.1 hypothetical protein -
  CHR53_RS08170 (CHR53_08205) med 1694241..1695188 (+) 948 WP_066394963.1 BMP family ABC transporter substrate-binding protein Regulator
  CHR53_RS08175 (CHR53_08210) comZ 1695204..1695392 (+) 189 WP_066394970.1 ComZ family protein Regulator
  CHR53_RS08180 (CHR53_08215) - 1695422..1695790 (-) 369 WP_066394977.1 hypothetical protein -
  CHR53_RS08185 (CHR53_08220) - 1695985..1696917 (+) 933 WP_066394985.1 beta-ketoacyl-ACP synthase III -
  CHR53_RS08190 (CHR53_08225) fabF 1696976..1698214 (+) 1239 WP_066394995.1 beta-ketoacyl-ACP synthase II -
  CHR53_RS08195 (CHR53_08230) - 1698334..1699125 (+) 792 WP_127486113.1 DUF2268 domain-containing protein -
  CHR53_RS08200 (CHR53_08235) - 1699278..1700300 (+) 1023 WP_127486115.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7265.49 Da        Isoelectric Point: 4.2110

>NTDB_id=240868 CHR53_RS08175 WP_066394970.1 1695204..1695392(+) (comZ) [Neobacillus mesonae strain H20-5]
MFEDKSLQFMQIAMKYLPEAKEQLDKSGVELSMDLIEPFMNLFMKVMQEAYELGREDAIANK

Nucleotide


Download         Length: 189 bp        

>NTDB_id=240868 CHR53_RS08175 WP_066394970.1 1695204..1695392(+) (comZ) [Neobacillus mesonae strain H20-5]
ATGTTCGAAGACAAATCATTACAATTTATGCAGATTGCGATGAAATATTTACCTGAAGCAAAGGAGCAGCTGGACAAGTC
TGGCGTTGAATTATCAATGGATCTTATTGAACCTTTTATGAATTTATTTATGAAAGTCATGCAAGAGGCATATGAACTCG
GCCGGGAGGATGCTATTGCCAATAAGTAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3T0HVV9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

74.138

93.548

0.694

Multiple sequence alignment