Detailed information NTG0240868

Bioinformatically predicted

Overview

• Name: clpP
• Type: Regulator
• Locus tag: C6376_RS23080
• Genome accession: NZ_CP028369
• Coordinates: 5108597..5109232 (-)
• Length: 211 a.a.
• NCBI ID: WP_107445176.1
• Uniprot ID: -
• Organism: Streptomyces sp. P3
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 5103597..5114232

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C6376_RS23050 (C6376_23035)	-	5104084..5105211 (+)	1128	WP_107445170.1	8-amino-7-oxononanoate synthase	-
C6376_RS23055 (C6376_23040)	-	5105286..5105534 (-)	249	WP_107445171.1	DUF397 domain-containing protein	-
C6376_RS23060 (C6376_23045)	-	5105544..5106416 (-)	873	WP_107445172.1	helix-turn-helix transcriptional regulator	-
C6376_RS23065 (C6376_23050)	-	5106630..5107112 (+)	483	WP_107445173.1	ATP-binding protein	-
C6376_RS23070 (C6376_23055)	-	5107258..5107731 (-)	474	WP_107445174.1	C40 family peptidase	-
C6376_RS23075 (C6376_23060)	-	5108284..5108589 (-)	306	WP_107445175.1	hypothetical protein	-
C6376_RS23080 (C6376_23065)	clpP	5108597..5109232 (-)	636	WP_107445176.1	ATP-dependent Clp protease proteolytic subunit	Regulator
C6376_RS23085 (C6376_23070)	-	5109306..5109584 (+)	279	WP_107445177.1	type II toxin-antitoxin system Phd/YefM family antitoxin	-
C6376_RS23090 (C6376_23075)	-	5109741..5110091 (-)	351	Protein_4497	ABC transporter permease	-
C6376_RS23095 (C6376_23080)	-	5110045..5110350 (+)	306	WP_319593577.1	hypothetical protein	-
C6376_RS23100 (C6376_23085)	-	5110483..5110785 (+)	303	WP_107449122.1	urease subunit gamma	-
C6376_RS23105 (C6376_23090)	-	5110800..5111111 (+)	312	WP_107445178.1	urease subunit beta	-
C6376_RS23110 (C6376_23095)	-	5111104..5112825 (+)	1722	WP_107445179.1	urease subunit alpha	-
C6376_RS23115 (C6376_23100)	-	5112843..5113517 (+)	675	WP_107445180.1	urease accessory protein UreF	-

Sequence

Protein

• Length: 211 a.a.
• Molecular weight: 22559.55 Da
• Isoelectric Point: 6.4883

>NTDB_id=240868 C6376_RS23080 WP_107445176.1 5108597..5109232(-) (clpP) [Streptomyces sp. P3]
MQRPSARHVLPEFTERTSSGHRTMDPYAKLLEERIVFLGAPVDDVSANDVTAQFMYLEHRDPDRDIALYINSPGGSFSAM
TALYDTIRFVTCAVSTTCLGQAGTSAAVLLAAGTPGKRFALPGARMTVRQPSLPEPVEGQASDLALRAEELARTRAALEG
MLVRHTGRTPEQVTSDIERGTFLTAPEAVAYGLVDGIVPSRKASAGAQGGR

Nucleotide

• Length: 636 bp

>NTDB_id=240868 C6376_RS23080 WP_107445176.1 5108597..5109232(-) (clpP) [Streptomyces sp. P3]
ATGCAGCGACCGTCCGCCCGCCATGTCCTGCCCGAGTTCACCGAACGGACGAGTTCGGGGCACCGCACGATGGATCCGTA
CGCGAAGCTGCTGGAGGAGCGGATCGTCTTCCTGGGCGCCCCGGTCGACGACGTCTCGGCGAACGACGTGACGGCCCAGT
TCATGTACCTCGAGCACAGGGACCCGGACCGGGACATCGCGCTGTACATCAACTCCCCCGGCGGCTCGTTCAGTGCCATG
ACGGCCCTGTACGACACGATCCGGTTCGTCACCTGCGCCGTGTCGACGACGTGTCTGGGGCAGGCGGGCACGTCGGCCGC
GGTCCTGCTGGCCGCGGGCACGCCGGGCAAGCGGTTCGCCCTGCCGGGGGCGCGGATGACGGTCCGCCAGCCGTCGCTGC
CCGAACCCGTCGAGGGCCAGGCCAGTGACCTGGCCCTCCGGGCCGAGGAGCTGGCCCGCACCCGTGCGGCCCTGGAGGGG
ATGCTCGTGCGGCACACCGGGCGGACGCCGGAGCAGGTGACCTCGGACATCGAGCGGGGCACGTTCCTCACCGCCCCGGA
AGCGGTGGCGTACGGCCTGGTGGACGGGATCGTCCCGAGCCGCAAGGCGTCCGCCGGGGCGCAGGGCGGGAGGTGA

Domains

Predicted by InterProScan.

• Clp protease (CLP_protease) (20-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpP	Bacillus subtilis subsp. subtilis str. 168	40.838	90.521	0.37
clpP	Streptococcus mutans UA159	38.614	95.735	0.37
clpP	Streptococcus pyogenes JRS4	40.206	91.943	0.37
clpP	Streptococcus pyogenes MGAS315	40.206	91.943	0.37
clpP	Streptococcus pneumoniae TIGR4	39.378	91.469	0.36
clpP	Streptococcus pneumoniae Rx1	39.378	91.469	0.36
clpP	Streptococcus pneumoniae D39	39.378	91.469	0.36
clpP	Streptococcus pneumoniae R6	39.378	91.469	0.36