Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   CHR53_RS03170 Genome accession   NZ_CP022572
Coordinates   662985..663935 (+) Length   316 a.a.
NCBI ID   WP_127484950.1    Uniprot ID   A0A3Q9QSH4
Organism   Neobacillus mesonae strain H20-5     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 657985..668935
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CHR53_RS03150 (CHR53_03170) - 658811..660325 (+) 1515 WP_127484946.1 acetyl-CoA hydrolase/transferase family protein -
  CHR53_RS03155 (CHR53_03175) - 660525..661073 (+) 549 WP_127484948.1 histidine phosphatase family protein -
  CHR53_RS03160 (CHR53_03180) - 661169..662212 (+) 1044 WP_127489642.1 DUF418 domain-containing protein -
  CHR53_RS03165 (CHR53_03185) - 662253..662738 (-) 486 WP_244933616.1 hypothetical protein -
  CHR53_RS03170 (CHR53_03190) ceuB 662985..663935 (+) 951 WP_127484950.1 ABC transporter permease Machinery gene
  CHR53_RS03175 (CHR53_03195) - 663928..664878 (+) 951 WP_066391274.1 iron chelate uptake ABC transporter family permease subunit -
  CHR53_RS03180 (CHR53_03200) - 664875..665636 (+) 762 WP_066391276.1 ABC transporter ATP-binding protein -
  CHR53_RS03185 (CHR53_03205) - 665656..666609 (+) 954 WP_066391281.1 siderophore ABC transporter substrate-binding protein -
  CHR53_RS03190 (CHR53_03210) - 666852..668312 (+) 1461 WP_066391283.1 PAS domain S-box protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34824.03 Da        Isoelectric Point: 10.1454

>NTDB_id=240857 CHR53_RS03170 WP_127484950.1 662985..663935(+) (ceuB) [Neobacillus mesonae strain H20-5]
MKKRYLLLTVLILSAGSLFIGVSRISPLDLLNVQSEETQIFLISRLPRLVAILLAGAGMSIAGLIMQQLSRNKFVSPTTA
GTLDATRLGILVSMLLFANASMLEKMAVAFAFALAGTFLFMQILDRIKFKDAIFIPLVGLMFGNILSSITTFFAYKADVI
QNMSAWLQGDFSMIMKGRYELLYISVPIIIISYLYANRFTVAGMGEDFSKNLGLAYRRIVNIGLILVALITTTVVLTVGT
IPFLGLIIPNIISIFKGDHLQKTLPHTALLGAIFLLICDILGRVIIYPYEISISLMVGVIGSGIFLYLLFRRKDYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=240857 CHR53_RS03170 WP_127484950.1 662985..663935(+) (ceuB) [Neobacillus mesonae strain H20-5]
ATGAAGAAAAGATATTTATTACTTACAGTACTAATATTGTCTGCCGGTTCATTGTTTATTGGCGTCAGCAGAATCTCTCC
TTTAGATTTATTGAACGTTCAATCTGAGGAAACACAAATCTTTTTAATCAGCCGGCTGCCAAGGCTTGTGGCGATTTTGC
TGGCTGGGGCAGGAATGAGCATTGCGGGATTAATCATGCAGCAATTGAGCCGGAATAAATTTGTCTCGCCAACAACGGCT
GGAACGTTGGACGCCACAAGGCTGGGAATACTCGTTTCCATGCTGCTGTTTGCAAATGCGTCCATGCTGGAAAAAATGGC
AGTTGCTTTTGCTTTCGCTCTTGCCGGGACGTTTTTGTTCATGCAGATCCTTGACCGTATCAAGTTTAAGGATGCCATAT
TCATTCCGTTGGTAGGGTTAATGTTCGGAAATATCCTGTCTTCCATAACCACCTTCTTCGCCTATAAGGCGGACGTGATT
CAAAATATGTCTGCGTGGCTGCAAGGGGATTTTTCCATGATCATGAAGGGCCGATATGAATTACTGTACATAAGTGTTCC
AATTATCATCATTTCCTATTTGTACGCAAACCGTTTTACGGTTGCGGGAATGGGGGAAGATTTTTCAAAAAATCTTGGGC
TTGCATATCGGCGAATCGTGAATATCGGATTAATTCTTGTTGCACTCATAACTACGACAGTTGTATTAACGGTCGGGACG
ATTCCGTTTCTTGGCTTAATCATTCCTAACATTATCTCGATTTTTAAAGGCGACCACTTACAAAAAACTTTGCCGCATAC
GGCACTGCTGGGCGCGATATTCCTTCTCATTTGTGACATTTTAGGCAGGGTGATTATTTATCCATATGAGATTTCGATCA
GTCTTATGGTTGGTGTCATCGGAAGCGGCATCTTCTTATACCTGCTGTTCAGGAGGAAAGACTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3Q9QSH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.333

94.937

0.516

Multiple sequence alignment