Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   CF389_RS07410 Genome accession   NZ_CP022556
Coordinates   1586860..1587324 (+) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain NJAU-Z9     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1581860..1592324
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CF389_RS19485 - 1582373..1582918 (-) 546 Protein_1430 hypothetical protein -
  CF389_RS07390 fadH 1583029..1583793 (-) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  CF389_RS07395 - 1583937..1584800 (+) 864 WP_063174788.1 metallophosphoesterase -
  CF389_RS07400 - 1584875..1585369 (+) 495 WP_088037173.1 L,D-transpeptidase family protein -
  CF389_RS07405 - 1585445..1586737 (+) 1293 WP_024085236.1 MFS transporter -
  CF389_RS07410 kre 1586860..1587324 (+) 465 WP_003154622.1 YkyB family protein Regulator
  CF389_RS07415 cheV 1587367..1588278 (-) 912 WP_014304917.1 chemotaxis protein CheV -
  CF389_RS19370 - 1588467..1588628 (+) 162 WP_007409608.1 hypothetical protein -
  CF389_RS07430 - 1588829..1590048 (+) 1220 Protein_1438 aminotransferase A -
  CF389_RS07435 - 1590024..1591844 (-) 1821 WP_003154628.1 PAS domain-containing protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=240717 CF389_RS07410 WP_003154622.1 1586860..1587324(+) (kre) [Bacillus velezensis strain NJAU-Z9]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=240717 CF389_RS07410 WP_003154622.1 1586860..1587324(+) (kre) [Bacillus velezensis strain NJAU-Z9]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment