Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | BSG32_RS16315 | Genome accession | NZ_CP022552 |
| Coordinates | 3232314..3232832 (-) | Length | 172 a.a. |
| NCBI ID | WP_005462534.1 | Uniprot ID | Q87LS4 |
| Organism | Vibrio parahaemolyticus strain MAVP-R | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3227314..3237832
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSG32_RS16290 (BSG32_16300) | rimM | 3227423..3227971 (-) | 549 | WP_005462552.1 | ribosome maturation factor RimM | - |
| BSG32_RS16295 (BSG32_16305) | rpsP | 3228000..3228248 (-) | 249 | WP_005379962.1 | 30S ribosomal protein S16 | - |
| BSG32_RS16300 (BSG32_16310) | ffh | 3228458..3229840 (-) | 1383 | WP_005462555.1 | signal recognition particle protein | - |
| BSG32_RS16305 (BSG32_16315) | - | 3230053..3230847 (+) | 795 | WP_005462565.1 | inner membrane protein YpjD | - |
| BSG32_RS16310 (BSG32_16320) | - | 3230973..3232253 (+) | 1281 | WP_005462557.1 | HlyC/CorC family transporter | - |
| BSG32_RS16315 (BSG32_16325) | luxS | 3232314..3232832 (-) | 519 | WP_005462534.1 | S-ribosylhomocysteine lyase | Regulator |
| BSG32_RS16320 (BSG32_16330) | - | 3232899..3233504 (-) | 606 | WP_015297256.1 | hypothetical protein | - |
| BSG32_RS16325 (BSG32_16335) | gshA | 3233529..3235097 (-) | 1569 | WP_015297257.1 | glutamate--cysteine ligase | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 19033.73 Da Isoelectric Point: 4.7134
>NTDB_id=240674 BSG32_RS16315 WP_005462534.1 3232314..3232832(-) (luxS) [Vibrio parahaemolyticus strain MAVP-R]
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRNHLNGDSVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWLASMEDVLKVESQNKIPELNEYQCGTAAMHSLEEAQQIAKNILAAGVSVNKNDELA
LPESMLKELRVD
MPLLDSFTVDHTRMNAPAVRVAKTMQTPKGDTITVFDLRFTAPNKDILSEKGIHTLEHLYAGFMRNHLNGDSVEIIDISP
MGCRTGFYMSLIGTPSEQQVADAWLASMEDVLKVESQNKIPELNEYQCGTAAMHSLEEAQQIAKNILAAGVSVNKNDELA
LPESMLKELRVD
Nucleotide
Download Length: 519 bp
>NTDB_id=240674 BSG32_RS16315 WP_005462534.1 3232314..3232832(-) (luxS) [Vibrio parahaemolyticus strain MAVP-R]
ATGCCTTTACTCGATAGCTTCACCGTAGACCACACTCGCATGAATGCACCAGCAGTGCGTGTCGCGAAAACCATGCAAAC
TCCAAAAGGAGATACCATTACGGTTTTCGACTTACGCTTCACTGCGCCTAACAAAGACATTCTTTCAGAGAAAGGCATTC
ATACACTAGAGCACTTGTACGCAGGTTTCATGCGCAATCACCTAAATGGTGACAGTGTGGAAATCATTGATATCTCACCG
ATGGGATGTCGCACTGGTTTTTACATGAGTCTCATTGGTACGCCTTCTGAACAGCAAGTCGCAGACGCATGGCTTGCTTC
TATGGAAGATGTGCTAAAAGTGGAAAGCCAGAACAAAATCCCTGAGCTAAATGAGTACCAGTGTGGTACTGCAGCGATGC
ATTCTTTAGAAGAAGCACAGCAAATTGCCAAGAACATTCTAGCCGCAGGTGTGTCTGTTAATAAAAACGACGAGTTGGCT
TTGCCAGAATCAATGCTAAAAGAGCTGCGCGTAGACTAA
ATGCCTTTACTCGATAGCTTCACCGTAGACCACACTCGCATGAATGCACCAGCAGTGCGTGTCGCGAAAACCATGCAAAC
TCCAAAAGGAGATACCATTACGGTTTTCGACTTACGCTTCACTGCGCCTAACAAAGACATTCTTTCAGAGAAAGGCATTC
ATACACTAGAGCACTTGTACGCAGGTTTCATGCGCAATCACCTAAATGGTGACAGTGTGGAAATCATTGATATCTCACCG
ATGGGATGTCGCACTGGTTTTTACATGAGTCTCATTGGTACGCCTTCTGAACAGCAAGTCGCAGACGCATGGCTTGCTTC
TATGGAAGATGTGCTAAAAGTGGAAAGCCAGAACAAAATCCCTGAGCTAAATGAGTACCAGTGTGGTACTGCAGCGATGC
ATTCTTTAGAAGAAGCACAGCAAATTGCCAAGAACATTCTAGCCGCAGGTGTGTCTGTTAATAAAAACGACGAGTTGGCT
TTGCCAGAATCAATGCTAAAAGAGCTGCGCGTAGACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
88.889 |
99.419 |
0.884 |