Detailed information NTG0240656

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BSG32_RS03505
• Genome accession: NZ_CP022552
• Coordinates: 680298..681344 (-)
• Length: 348 a.a.
• NCBI ID: WP_254894148.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain MAVP-R
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 675298..686344

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSG32_RS03475 (BSG32_03485)	zapB	675468..675710 (+)	243	WP_005481417.1	cell division protein ZapB	-
BSG32_RS03480 (BSG32_03490)	rraA	675815..676327 (-)	513	WP_005457192.1	ribonuclease E activity regulator RraA	-
BSG32_RS03485 (BSG32_03495)	-	676404..677321 (-)	918	WP_017449001.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BSG32_RS03490 (BSG32_03500)	hslU	677506..678837 (-)	1332	WP_021449544.1	HslU--HslV peptidase ATPase subunit	-
BSG32_RS03495 (BSG32_03505)	hslV	678861..679412 (-)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
BSG32_RS03500 (BSG32_03510)	ftsN	679577..680122 (-)	546	WP_005481405.1	cell division protein FtsN	-
BSG32_RS03505 (BSG32_03515)	cytR	680298..681344 (-)	1047	WP_254894148.1	DNA-binding transcriptional regulator CytR	Regulator
BSG32_RS03510 (BSG32_03520)	priA	681638..683842 (-)	2205	WP_089190137.1	primosomal protein N'	-
BSG32_RS03520 (BSG32_03530)	rpmE	684137..684358 (+)	222	WP_005457203.1	50S ribosomal protein L31	-
BSG32_RS03525 (BSG32_03535)	rpsJ	684816..685127 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
BSG32_RS03530 (BSG32_03540)	rplC	685142..685771 (+)	630	WP_005456132.1	50S ribosomal protein L3	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38445.17 Da
• Isoelectric Point: 6.7430

>NTDB_id=240656 BSG32_RS03505 WP_254894148.1 680298..681344(-) (cytR) [Vibrio parahaemolyticus strain MAVP-R]
MTSSWQKFERLNTMATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVP
DICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEF
APELELPTVHIDNLTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKDPQYSVITEFSFDGGAKA
VRKLLELPEPPTAIFCHCDTMAIGAIQEAKRLGLRVPQDLSVVGFDDINFAQYCDPPLTTISQPRYEIGRQAMLMMLELL
KGHDVHSGSRLLETKLVVRGSAAPPQRA

Nucleotide

• Length: 1047 bp

>NTDB_id=240656 BSG32_RS03505 WP_254894148.1 680298..681344(-) (cytR) [Vibrio parahaemolyticus strain MAVP-R]
ATAACGTCATCTTGGCAAAAATTTGAGAGGTTAAACACTATGGCGACAATGAAGGATGTTGCCCAGCTTGCGGGAGTGTC
GACAGCTACGGTATCTCGAGCATTAATGAATCCAGAAAAAGTCTCTTCTTCAACAAGAAAAAGAGTCGAAGATGCCGTCC
TTGAAGCGGGCTATTCTCCAAATTCATTAGCGCGTAATCTACGTAGAAACGAATCAAAAACGATTGTTACCATCGTTCCT
GACATCTGTGATCCTTACTTTTCTGAAATCATTCGTGGTATCGAAGACGCCGCTATGGAACATGGCTACCTCGTACTGCT
CGGTGACAGCGGCCAGCAGAAAAAGCGTGAAAGCTCGTTTGTGAATCTAGTGTTCACCAAACAAGCCGATGGCATGTTAC
TGCTTGGCACCGACCTGCCATTTGATGTCAGCAAGCCAGAACAGAAAAACCTGCCACCAATGGTCATGGCTTGTGAGTTT
GCGCCAGAGCTAGAATTACCAACCGTGCACATTGACAACCTAACGTCTGCTTTTGAAGCGGTCAATTACCTAACTCAACT
TGGCCATAAACGCATAGCACAAATTTCAGGGCCAGACACAGCGGTATTGTGCCAGTTCCGCCAGCAAGGTTATCAACAAG
CCTTGCGTCGCGCGGGGATCAGTAAAGACCCACAATACAGTGTTATCACTGAGTTTTCTTTTGACGGCGGCGCGAAAGCT
GTACGTAAGTTGCTAGAACTTCCAGAGCCACCAACTGCGATTTTCTGCCACTGCGACACCATGGCAATCGGCGCAATCCA
AGAAGCGAAACGACTCGGCCTGCGCGTTCCGCAAGATTTGTCAGTGGTTGGTTTCGATGATATCAACTTTGCTCAATACT
GCGATCCACCGTTAACGACCATTTCTCAACCTCGTTATGAAATTGGCCGCCAAGCGATGCTTATGATGCTTGAACTACTT
AAAGGCCATGACGTTCATTCAGGTTCACGCTTACTAGAAACTAAGCTTGTTGTCCGTGGTAGCGCAGCGCCACCGCAACG
CGCCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (181-341)

• Bacterial regulatory proteins, lacI family (LacI) (16-61)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	100	100	1
cytR	Vibrio cholerae C6706	90.719	95.977	0.871