Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | BSG32_RS00160 | Genome accession | NZ_CP022552 |
| Coordinates | 27506..28021 (-) | Length | 171 a.a. |
| NCBI ID | WP_021449759.1 | Uniprot ID | - |
| Organism | Vibrio parahaemolyticus strain MAVP-R | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 22506..33021
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSG32_RS00145 (BSG32_00145) | aroB | 23887..24987 (-) | 1101 | WP_005480443.1 | 3-dehydroquinate synthase | - |
| BSG32_RS00150 (BSG32_00150) | aroK | 25019..25537 (-) | 519 | WP_005381319.1 | shikimate kinase AroK | - |
| BSG32_RS00155 (BSG32_00155) | pilQ | 25726..27474 (-) | 1749 | WP_025442303.1 | type IV pilus secretin PilQ | Machinery gene |
| BSG32_RS00160 (BSG32_00160) | pilP | 27506..28021 (-) | 516 | WP_021449759.1 | pilus assembly protein PilP | Machinery gene |
| BSG32_RS00165 (BSG32_00165) | pilO | 28011..28604 (-) | 594 | WP_005480482.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| BSG32_RS00170 (BSG32_00170) | pilN | 28597..29175 (-) | 579 | WP_021449760.1 | PilN domain-containing protein | Machinery gene |
| BSG32_RS00175 (BSG32_00175) | pilM | 29159..30175 (-) | 1017 | WP_021449761.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| BSG32_RS00180 (BSG32_00180) | - | 30318..32888 (+) | 2571 | WP_025622219.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19003.18 Da Isoelectric Point: 10.3600
>NTDB_id=240644 BSG32_RS00160 WP_021449759.1 27506..28021(-) (pilP) [Vibrio parahaemolyticus strain MAVP-R]
MRNKSLLMVLVSALLVGCQANDESLTDFIRGVESQARRDVETLKPADKYIAVAYAPEVMRAPFELPKEATIATQPVARKD
CWQPPNRARSGKLEKFPLSQLRLKGVMGMENTVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVTHSYLLINETLPDGLGC
WQKRKVKLALR
MRNKSLLMVLVSALLVGCQANDESLTDFIRGVESQARRDVETLKPADKYIAVAYAPEVMRAPFELPKEATIATQPVARKD
CWQPPNRARSGKLEKFPLSQLRLKGVMGMENTVSGLVQAPNGTVYKVKPGQYLGRNNGKVTHVTHSYLLINETLPDGLGC
WQKRKVKLALR
Nucleotide
Download Length: 516 bp
>NTDB_id=240644 BSG32_RS00160 WP_021449759.1 27506..28021(-) (pilP) [Vibrio parahaemolyticus strain MAVP-R]
ATGAGAAATAAATCTTTGCTGATGGTGTTGGTAAGCGCTCTATTGGTCGGGTGCCAGGCGAATGATGAATCATTAACGGA
TTTTATTCGTGGTGTTGAGAGTCAGGCGCGGCGAGATGTGGAGACGCTCAAACCTGCTGACAAATACATCGCAGTAGCGT
ATGCCCCAGAAGTGATGCGTGCTCCTTTCGAATTGCCCAAAGAGGCGACCATCGCGACTCAACCTGTGGCGAGAAAAGAT
TGTTGGCAACCGCCGAACCGAGCGAGATCTGGCAAGTTAGAAAAATTCCCACTCAGCCAACTTCGTTTAAAAGGAGTGAT
GGGGATGGAGAACACCGTTTCTGGTTTAGTACAAGCCCCGAATGGCACGGTTTACAAAGTGAAACCAGGTCAATACCTCG
GGCGTAATAACGGTAAGGTCACCCATGTTACCCACTCCTATTTGTTGATTAATGAAACCTTGCCCGATGGTTTGGGATGC
TGGCAAAAACGTAAAGTTAAGTTGGCTTTGAGATAG
ATGAGAAATAAATCTTTGCTGATGGTGTTGGTAAGCGCTCTATTGGTCGGGTGCCAGGCGAATGATGAATCATTAACGGA
TTTTATTCGTGGTGTTGAGAGTCAGGCGCGGCGAGATGTGGAGACGCTCAAACCTGCTGACAAATACATCGCAGTAGCGT
ATGCCCCAGAAGTGATGCGTGCTCCTTTCGAATTGCCCAAAGAGGCGACCATCGCGACTCAACCTGTGGCGAGAAAAGAT
TGTTGGCAACCGCCGAACCGAGCGAGATCTGGCAAGTTAGAAAAATTCCCACTCAGCCAACTTCGTTTAAAAGGAGTGAT
GGGGATGGAGAACACCGTTTCTGGTTTAGTACAAGCCCCGAATGGCACGGTTTACAAAGTGAAACCAGGTCAATACCTCG
GGCGTAATAACGGTAAGGTCACCCATGTTACCCACTCCTATTTGTTGATTAATGAAACCTTGCCCGATGGTTTGGGATGC
TGGCAAAAACGTAAAGTTAAGTTGGCTTTGAGATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio campbellii strain DS40M4 |
83.041 |
100 |
0.83 |
| pilP | Vibrio cholerae strain A1552 |
56.977 |
100 |
0.573 |