Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | C7M30_RS18550 | Genome accession | NZ_CP028218 |
| Coordinates | 3602376..3603503 (-) | Length | 375 a.a. |
| NCBI ID | WP_029727091.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM102756 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3597376..3608503
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7M30_RS18515 (C7M30_03673) | cdiI | 3597953..3598312 (-) | 360 | WP_160244843.1 | ribonuclease toxin immunity protein CdiI | - |
| C7M30_RS18520 (C7M30_03674) | - | 3598409..3598861 (-) | 453 | WP_160244844.1 | SMI1/KNR4 family protein | - |
| C7M30_RS22215 | - | 3598960..3599399 (-) | 440 | Protein_3619 | SMI1/KNR4 family protein | - |
| C7M30_RS18535 (C7M30_03677) | - | 3599802..3600089 (-) | 288 | WP_032726216.1 | hypothetical protein | - |
| C7M30_RS22220 (C7M30_03678) | - | 3600103..3602028 (-) | 1926 | WP_160244845.1 | T7SS effector LXG polymorphic toxin | - |
| C7M30_RS18545 (C7M30_03679) | phrE | 3602252..3602386 (-) | 135 | WP_014114495.1 | phosphatase RapE inhibitor PhrE | - |
| C7M30_RS18550 (C7M30_03680) | rapC | 3602376..3603503 (-) | 1128 | WP_029727091.1 | response regulator aspartate phosphatase RapE | Regulator |
| C7M30_RS18555 | - | 3603929..3604066 (+) | 138 | Protein_3624 | sortase | - |
| C7M30_RS18560 (C7M30_03681) | nfsA | 3604194..3604934 (-) | 741 | WP_095252389.1 | oxygen-insensitive NADPH nitroreductase | - |
| C7M30_RS18565 (C7M30_03682) | - | 3605319..3605678 (-) | 360 | WP_003226073.1 | winged helix-turn-helix transcriptional regulator | - |
| C7M30_RS18570 (C7M30_03683) | - | 3605904..3606638 (+) | 735 | WP_095252388.1 | NAD(P)-binding domain-containing protein | - |
| C7M30_RS18575 (C7M30_03684) | - | 3606983..3608152 (-) | 1170 | WP_095252387.1 | MFS transporter | - |
Sequence
Protein
Download Length: 375 a.a. Molecular weight: 44622.44 Da Isoelectric Point: 7.5547
>NTDB_id=240569 C7M30_RS18550 WP_029727091.1 3602376..3603503(-) (rapC) [Bacillus subtilis strain SRCM102756]
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTLPSDENRMELSEYL
KKIEGHKKKLDNMRAYYYNFFRGMYEFRNGEYTKAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVQYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI
MISITSAEVGMKINEWHRHIQKFNVTDAEMLKAEIERDIEVMEEDQDLLIYYQLMAFRHKIMLEYTLPSDENRMELSEYL
KKIEGHKKKLDNMRAYYYNFFRGMYEFRNGEYTKAITYYKKAERKIPTISDKIEKAEFYFKLSEVYYHMKMTHISMHYAE
LSYNIYKKHELYSVRRIQCHFVIAGNYDDLENHEKALPHLQEALKGAELLKSKNTHIYATAFFNLGNCYHKMDNLNKAAR
YIEQALVQYRKINSDVLPQAYHDLALIYFKQGKKEQAMDCFRKGIRSAVDFKDELFMNLFEALDVLYIRNGDTPKLLNIF
SRLENGKGYPYLEELALLGGNLFDYNGKIEDSIICFKKMVYAQKQISKGECMYEI
Nucleotide
Download Length: 1128 bp
>NTDB_id=240569 C7M30_RS18550 WP_029727091.1 3602376..3603503(-) (rapC) [Bacillus subtilis strain SRCM102756]
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAACGTTACTGA
TGCTGAAATGTTAAAAGCTGAAATCGAACGTGATATAGAGGTTATGGAAGAAGATCAAGATTTGCTTATTTATTATCAAT
TGATGGCCTTTCGCCATAAGATCATGTTGGAATACACGCTGCCATCTGATGAAAACCGAATGGAACTTTCAGAATATTTA
AAGAAAATAGAAGGGCATAAGAAGAAGCTGGACAATATGCGAGCATATTATTATAACTTCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAAGGCTATTACATATTACAAAAAAGCTGAACGCAAAATTCCAACGATCTCCGACAAGATTG
AAAAAGCTGAGTTTTATTTTAAGTTATCCGAAGTCTATTATCATATGAAAATGACTCACATCTCAATGCACTACGCTGAA
CTTTCATACAACATCTATAAAAAACATGAACTTTATTCTGTTCGGCGTATTCAGTGCCATTTTGTTATTGCTGGCAACTA
CGATGACCTTGAAAATCATGAAAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCTGAGCTGCTTAAAAGTAAAA
ATACTCACATCTATGCCACCGCATTTTTCAATCTCGGTAACTGCTATCACAAAATGGACAACCTAAATAAGGCTGCACGT
TACATCGAACAAGCTTTGGTTCAATACAGAAAAATAAACTCTGACGTACTTCCACAGGCCTATCATGACCTAGCGTTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATCAGAAGTGCTGTAGATTTTAAAGACG
AACTTTTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGTGATACACCTAAACTCCTCAACATTTTT
TCTCGTTTAGAGAATGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA
TTGATATCAATCACATCAGCTGAAGTGGGAATGAAGATTAATGAATGGCATAGGCATATTCAAAAATTCAACGTTACTGA
TGCTGAAATGTTAAAAGCTGAAATCGAACGTGATATAGAGGTTATGGAAGAAGATCAAGATTTGCTTATTTATTATCAAT
TGATGGCCTTTCGCCATAAGATCATGTTGGAATACACGCTGCCATCTGATGAAAACCGAATGGAACTTTCAGAATATTTA
AAGAAAATAGAAGGGCATAAGAAGAAGCTGGACAATATGCGAGCATATTATTATAACTTCTTCCGCGGGATGTATGAGTT
TAGAAACGGTGAATACACAAAGGCTATTACATATTACAAAAAAGCTGAACGCAAAATTCCAACGATCTCCGACAAGATTG
AAAAAGCTGAGTTTTATTTTAAGTTATCCGAAGTCTATTATCATATGAAAATGACTCACATCTCAATGCACTACGCTGAA
CTTTCATACAACATCTATAAAAAACATGAACTTTATTCTGTTCGGCGTATTCAGTGCCATTTTGTTATTGCTGGCAACTA
CGATGACCTTGAAAATCATGAAAAAGCTCTCCCCCACCTTCAAGAAGCTTTAAAAGGTGCTGAGCTGCTTAAAAGTAAAA
ATACTCACATCTATGCCACCGCATTTTTCAATCTCGGTAACTGCTATCACAAAATGGACAACCTAAATAAGGCTGCACGT
TACATCGAACAAGCTTTGGTTCAATACAGAAAAATAAACTCTGACGTACTTCCACAGGCCTATCATGACCTAGCGTTGAT
TTATTTTAAACAAGGCAAAAAAGAACAAGCAATGGATTGCTTCCGCAAAGGAATCAGAAGTGCTGTAGATTTTAAAGACG
AACTTTTTATGAACTTATTTGAAGCATTAGACGTTCTTTATATAAGAAATGGTGATACACCTAAACTCCTCAACATTTTT
TCTCGTTTAGAGAATGGCAAAGGATACCCTTATCTGGAAGAGCTGGCATTGTTAGGAGGCAACCTTTTCGATTATAATGG
AAAAATAGAGGATAGTATCATCTGTTTCAAGAAGATGGTATATGCTCAAAAGCAAATATCGAAAGGGGAATGCATGTATG
AAATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
40.897 |
100 |
0.413 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
38.196 |
100 |
0.384 |