Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   CG712_RS04060 Genome accession   NZ_CP022547
Coordinates   783279..784010 (-) Length   243 a.a.
NCBI ID   WP_002951673.1    Uniprot ID   A0AAP2RM94
Organism   Streptococcus thermophilus strain B59671     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 778279..789010
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG712_RS04035 (CG712_04070) - 779345..780525 (+) 1181 Protein_789 NAD(P)/FAD-dependent oxidoreductase -
  CG712_RS04045 (CG712_04080) trmB 780745..781386 (-) 642 WP_096811617.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  CG712_RS04050 (CG712_04085) ccrZ 781396..782124 (-) 729 WP_416069060.1 cell cycle regulator CcrZ -
  CG712_RS04055 (CG712_04090) pptB 782245..783279 (-) 1035 WP_375708305.1 ABC transporter permease Regulator
  CG712_RS04060 (CG712_04095) pptA 783279..784010 (-) 732 WP_002951673.1 ABC transporter ATP-binding protein Regulator
  CG712_RS04065 (CG712_04100) - 784075..784494 (+) 420 WP_096811619.1 HIT family protein -
  CG712_RS04070 (CG712_04105) - 784491..784799 (+) 309 WP_096811620.1 hypothetical protein -
  CG712_RS10220 - 785351..785521 (-) 171 WP_011226439.1 hypothetical protein -
  CG712_RS04080 (CG712_04115) - 785591..786226 (-) 636 WP_014727665.1 DUF4230 domain-containing protein -
  CG712_RS10600 - 786245..786370 (-) 126 WP_259700230.1 hypothetical protein -
  CG712_RS04085 (CG712_04120) - 786783..788882 (-) 2100 WP_096811622.1 ATP-dependent Clp protease ATP-binding subunit -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26830.05 Da        Isoelectric Point: 4.4606

>NTDB_id=240565 CG712_RS04060 WP_002951673.1 783279..784010(-) (pptA) [Streptococcus thermophilus strain B59671]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIAIDGLTIQQDPASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMARADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKANGKSILMSTHVLDSAEKMCDRFVILHHGQILAQGTIDELRQTFGDSSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=240565 CG712_RS04060 WP_002951673.1 783279..784010(-) (pptA) [Streptococcus thermophilus strain B59671]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTACGCTAATATTCCCGTCCTAAAAGATGTCACTTTTGAGGTGGCTGATGG
TGAATTGGTTGGTCTCATTGGTCTTAATGGTGCTGGGAAATCAACAACAATTAACGAGATTATTGGTCTCTTAACACCCT
ATGGAGGACAGATTGCCATTGATGGGTTAACTATTCAACAAGATCCAGCTAGCTATCGTCAGAAGATTGGCTATATTCCT
GAAACGCCAAGTCTTTATGAAGAATTGACGCTTCGTGAACATTTGGAAACGGTGTTGATGGCCTATGGTCTTGATGTGAC
TGAGGGTATGGCACGTGCGGACAAGTACCTCAAACTCTTTCGCTTAGATGAAAAGTTGGACTGGTTCCCGACTCAGTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCCTTTATTGTAAATCCAAGTCTTTTCATTGTTGATGAGCCATTT
TTGGGATTGGATCCCTTGGCGATTTCTGATTTGATTGAGCTTCTGGCTGAGGAAAAAGCCAATGGCAAGTCTATTCTCAT
GTCGACTCACGTTTTGGATTCAGCTGAGAAGATGTGTGATCGCTTTGTGATTTTGCACCATGGACAGATCTTGGCACAGG
GGACGATTGATGAGCTTCGTCAGACCTTTGGTGACAGTAGTGCTAGTCTTAACGATATCTATATGCAGTTGACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

100

100

1
  pptA Streptococcus salivarius strain HSISS4

97.119

100

0.971

Multiple sequence alignment