Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C7M30_RS14025 Genome accession   NZ_CP028218
Coordinates   2725907..2726620 (+) Length   237 a.a.
NCBI ID   WP_003228163.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102756     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2720907..2731620
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M30_RS13990 (C7M30_02782) rppI 2721153..2721629 (+) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -
  C7M30_RS13995 (C7M30_02783) rapZ 2721654..2722541 (+) 888 WP_003228143.1 RNase adapter RapZ -
  C7M30_RS14000 (C7M30_02784) mgfK 2722543..2723496 (+) 954 WP_049140423.1 gluconeogenesis morphogenetic factor -
  C7M30_RS14005 (C7M30_02785) whiA 2723519..2724469 (+) 951 WP_003243775.1 DNA-binding protein WhiA -
  C7M30_RS14010 (C7M30_02786) crh 2724493..2724750 (+) 258 WP_160244577.1 HPr family phosphocarrier protein -
  C7M30_RS14015 (C7M30_02787) yvcN 2724751..2725515 (+) 765 WP_080529834.1 arylamine N-acetyltransferase -
  C7M30_RS14020 (C7M30_02788) - 2725551..2725760 (-) 210 WP_021480676.1 hypothetical protein -
  C7M30_RS14025 (C7M30_02789) braR 2725907..2726620 (+) 714 WP_003228163.1 two-component system response regulator PsdR Regulator
  C7M30_RS14030 (C7M30_02790) psdS 2726614..2727684 (+) 1071 WP_003242699.1 two-component sensor histidine kinase PsdS -
  C7M30_RS14035 (C7M30_02791) psdA 2727767..2728546 (+) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  C7M30_RS14040 (C7M30_02792) psdB 2728521..2730461 (+) 1941 WP_032726921.1 lantibiotic ABC transporter permease PsdB -
  C7M30_RS14045 (C7M30_02793) ghrB 2730498..2731475 (-) 978 WP_072173470.1 D-glycerate dehydrogenase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=240540 C7M30_RS14025 WP_003228163.1 2725907..2726620(+) (braR) [Bacillus subtilis strain SRCM102756]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=240540 C7M30_RS14025 WP_003228163.1 2725907..2726620(+) (braR) [Bacillus subtilis strain SRCM102756]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGTAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTAACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAGTGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43