Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   CG798_RS20185 Genome accession   NZ_CP022531
Coordinates   1410524..1410688 (+) Length   54 a.a.
NCBI ID   WP_012116773.1    Uniprot ID   -
Organism   Bacillus velezensis strain TB1501     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1405524..1415688
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG798_RS20180 srfAB 1407469..1410459 (+) 2991 Protein_1381 surfactin non-ribosomal peptide synthetase SrfAB -
  CG798_RS20185 comS 1410524..1410688 (+) 165 WP_012116773.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6153.16 Da        Isoelectric Point: 12.0559

>NTDB_id=240451 CG798_RS20185 WP_012116773.1 1410524..1410688(+) (comS) [Bacillus velezensis strain TB1501]
MRARRSSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=240451 CG798_RS20185 WP_012116773.1 1410524..1410688(+) (comS) [Bacillus velezensis strain TB1501]
ATGAGAGCGAGGAGGAGCAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTTTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

61.364

81.481

0.5

Multiple sequence alignment