Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C7M29_RS08300 Genome accession   NZ_CP028217
Coordinates   1601014..1601727 (+) Length   237 a.a.
NCBI ID   WP_033883478.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102751     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1596014..1606727
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M29_RS08265 (C7M29_01625) rppI 1596260..1596736 (+) 477 WP_010886622.1 8-oxo-dGTP diphosphatase -
  C7M29_RS08270 (C7M29_01626) rapZ 1596761..1597648 (+) 888 WP_003243903.1 RNase adapter RapZ -
  C7M29_RS08275 (C7M29_01627) mgfK 1597650..1598603 (+) 954 WP_046161093.1 gluconeogenesis morphogenetic factor -
  C7M29_RS08280 (C7M29_01628) whiA 1598626..1599576 (+) 951 WP_003243775.1 DNA-binding protein WhiA -
  C7M29_RS08285 (C7M29_01629) crh 1599600..1599857 (+) 258 WP_003219835.1 HPr family phosphocarrier protein -
  C7M29_RS08290 (C7M29_01630) yvcN 1599858..1600622 (+) 765 WP_161476673.1 arylamine N-acetyltransferase -
  C7M29_RS08295 (C7M29_01631) - 1600658..1600867 (-) 210 WP_021480676.1 hypothetical protein -
  C7M29_RS08300 (C7M29_01632) braR 1601014..1601727 (+) 714 WP_033883478.1 two-component system response regulator PsdR Regulator
  C7M29_RS08305 (C7M29_01633) psdS 1601721..1602791 (+) 1071 WP_161476674.1 two-component sensor histidine kinase PsdS -
  C7M29_RS08310 (C7M29_01634) psdA 1602874..1603653 (+) 780 WP_161476675.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  C7M29_RS08315 (C7M29_01635) psdB 1603628..1605568 (+) 1941 WP_160221835.1 lantibiotic ABC transporter permease PsdB -
  C7M29_RS08320 (C7M29_01636) ghrB 1605605..1606582 (-) 978 WP_080332215.1 D-glycerate dehydrogenase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27502.33 Da        Isoelectric Point: 4.6062

>NTDB_id=240342 C7M29_RS08300 WP_033883478.1 1601014..1601727(+) (braR) [Bacillus subtilis strain SRCM102751]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSSRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=240342 C7M29_RS08300 WP_033883478.1 1601014..1601727(+) (braR) [Bacillus subtilis strain SRCM102751]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAACCGTTCCATTTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAAAATGAGGCCGAATGGAACAGCTCCCGTATTCTGTTTTCTCAAAAA
GAATTTCAGCTTCTCTCTATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43