Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C7M29_RS05710 Genome accession   NZ_CP028217
Coordinates   1097457..1098146 (+) Length   229 a.a.
NCBI ID   WP_029318588.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102751     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1092457..1103146
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M29_RS05690 (C7M29_01122) iolG 1093611..1094645 (+) 1035 WP_003244482.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -
  C7M29_RS05695 (C7M29_01123) iolH 1094665..1095534 (+) 870 WP_015250852.1 sugar phosphate isomerase/epimerase -
  C7M29_RS05700 (C7M29_01124) iolI 1095620..1096456 (+) 837 WP_080529990.1 2-keto-myo-inositol isomerase -
  C7M29_RS05705 (C7M29_01125) iolJ 1096477..1097349 (+) 873 WP_119899950.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  C7M29_RS05710 (C7M29_01126) braR 1097457..1098146 (+) 690 WP_029318588.1 two-component system response regulator YxdJ Regulator
  C7M29_RS05715 (C7M29_01127) yxdK 1098143..1099120 (+) 978 WP_161476568.1 two-component system sensor histidine kinase YxdK -
  C7M29_RS05720 (C7M29_01128) yxdL 1099264..1100037 (+) 774 WP_144531298.1 ABC transporter ATP-binding protein YxdL -
  C7M29_RS05725 (C7M29_01129) yxdM 1100012..1101880 (+) 1869 WP_029318589.1 ABC transporter permease YxdM -
  C7M29_RS05730 (C7M29_01130) yxeA 1101894..1102241 (+) 348 WP_128738465.1 YxeA family protein -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26584.38 Da        Isoelectric Point: 4.9502

>NTDB_id=240327 C7M29_RS05710 WP_029318588.1 1097457..1098146(+) (braR) [Bacillus subtilis strain SRCM102751]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSLLSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=240327 C7M29_RS05710 WP_029318588.1 1097457..1098146(+) (braR) [Bacillus subtilis strain SRCM102751]
TTGAATAAAATTATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAACGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTGGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTCCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCTTGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(153-225)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406