Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   CGZ77_RS10030 Genome accession   NZ_CP022527
Coordinates   2020492..2022531 (-) Length   679 a.a.
NCBI ID   WP_009424916.1    Uniprot ID   -
Organism   Neisseria sp. KEM232     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2015492..2027531
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGZ77_RS10005 (CGZ77_10010) - 2016286..2016624 (-) 339 WP_051040394.1 DUF2750 domain-containing protein -
  CGZ77_RS10010 (CGZ77_10015) argG 2016760..2018097 (+) 1338 WP_009424919.1 argininosuccinate synthase -
  CGZ77_RS10015 (CGZ77_10020) - 2018252..2018821 (+) 570 WP_007341893.1 GNAT family N-acetyltransferase -
  CGZ77_RS10020 (CGZ77_10025) - 2018894..2019646 (+) 753 WP_009424918.1 hypothetical protein -
  CGZ77_RS10025 (CGZ77_10030) - 2019710..2020411 (-) 702 WP_036495425.1 M48 family metallopeptidase -
  CGZ77_RS10030 (CGZ77_10035) recG 2020492..2022531 (-) 2040 WP_009424916.1 ATP-dependent DNA helicase RecG Machinery gene
  CGZ77_RS10035 (CGZ77_10040) tldD 2022910..2024400 (+) 1491 WP_036495424.1 metalloprotease TldD -
  CGZ77_RS10040 (CGZ77_10045) - 2024534..2024758 (-) 225 WP_009424911.1 sulfurtransferase TusA family protein -
  CGZ77_RS10045 (CGZ77_10050) - 2024892..2025494 (+) 603 WP_009424910.1 CNP1-like family protein -
  CGZ77_RS10050 (CGZ77_10055) - 2026071..2027112 (-) 1042 Protein_2007 DDE-type integrase/transposase/recombinase -

Sequence

Protein


Download         Length: 679 a.a.        Molecular weight: 75040.06 Da        Isoelectric Point: 7.7463

>NTDB_id=240325 CGZ77_RS10030 WP_009424916.1 2020492..2022531(-) (recG) [Neisseria sp. KEM232]
MTPETRKQLKITDTAAKKLEKLHLHTAWDLVLHLPLRYEDETHIMPLQDAPVGVPCQVEGTVLHQEVMFKPRKQLIVQIG
DNAGNVLFLRFIHFYPSQQKQLAVGKRIRAVGEIKHGFYGDEMIHPKIRDAETSGLAESLTPVYPTVNGLNQPTLRRIIQ
TALDDTPLHDTLPDALLGRLKLPHLAESLRLLHAPPPSLSVQQLSDGALPAWQRLKFDELLAQQLSMRLARQKRISGQAA
PLTGNGTLSQPLLNALPFALTRAQEKALAEIRQDMAQTFPMHRLLQGDVGSGKTIVAALAALAAVEAGAQVAVMAPTEIL
AEQHFIKFKQWFDPLGLDIAWLSGSQRKKAKDEAKAQLSDGLVKIAVGTHALFQDDVAFQNLGLVIVDEQHRFGVAQRLA
LKNKGRDVHQLMMSATPIPRTLAMSFFADLDVSLIDELPPGRTPIQTRLVNSLRRAEVEGYLLNICRKGQQAYWVCPLIE
ESETLQLQTATETLEQLQTALPELNIGLVHGRMKAAEKAAVMAEFAAGRLNVLVATTVIEVGVDVPNAALMVIEHAERMG
LAQLHQLRGRVGRGAAKSVCVLLFAEPLSELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFANLEQD
LHLLEHAREIAPQLIEQHPDIVKAHLDRWLASRAAYMGA

Nucleotide


Download         Length: 2040 bp        

>NTDB_id=240325 CGZ77_RS10030 WP_009424916.1 2020492..2022531(-) (recG) [Neisseria sp. KEM232]
ATGACGCCCGAAACCCGAAAACAGCTCAAAATCACCGACACCGCCGCCAAAAAGCTGGAAAAGCTCCATCTGCACACCGC
TTGGGATTTGGTGCTGCACCTGCCGCTGCGCTACGAAGACGAAACCCACATCATGCCGCTGCAAGACGCGCCCGTCGGCG
TGCCCTGTCAGGTGGAAGGCACGGTGCTGCATCAGGAAGTCATGTTCAAACCGCGCAAACAACTGATTGTGCAAATCGGC
GACAACGCGGGCAACGTGTTGTTTTTGCGCTTTATCCATTTTTACCCGAGCCAGCAGAAGCAGCTTGCCGTCGGCAAGCG
CATCCGCGCCGTGGGCGAAATCAAACACGGTTTTTACGGCGACGAGATGATTCACCCCAAAATCCGCGATGCCGAAACGA
GCGGCCTCGCCGAGAGCCTCACTCCGGTTTATCCCACCGTAAACGGGCTGAACCAGCCCACCCTGCGCCGCATCATTCAG
ACGGCCTTAGACGACACCCCGCTGCACGACACCCTGCCCGACGCGCTGTTAGGCCGTCTGAAACTGCCGCATTTGGCCGA
AAGCCTGCGCCTTTTGCACGCGCCGCCGCCGAGCCTGAGCGTGCAGCAGTTGTCCGACGGCGCACTGCCCGCATGGCAGC
GGCTCAAATTCGACGAACTTCTGGCGCAGCAGCTTTCCATGCGGCTGGCTCGGCAAAAGCGCATCAGCGGTCAGGCCGCA
CCGCTCACCGGCAACGGCACGCTGTCGCAGCCCCTGTTAAACGCGCTGCCCTTCGCCCTTACCCGCGCCCAAGAAAAAGC
CCTTGCCGAAATCCGGCAGGACATGGCGCAAACCTTTCCCATGCACCGCCTGTTGCAGGGCGATGTAGGCAGCGGCAAAA
CCATCGTCGCCGCCTTGGCCGCACTCGCCGCCGTGGAAGCCGGCGCACAAGTGGCCGTAATGGCACCCACCGAAATCCTC
GCCGAACAGCACTTTATCAAGTTCAAACAATGGTTTGATCCGCTCGGTCTCGACATCGCATGGCTCTCGGGCAGCCAGCG
CAAAAAAGCCAAAGACGAAGCCAAAGCGCAGCTTTCAGACGGCCTGGTCAAAATCGCCGTCGGCACGCACGCTCTGTTTC
AAGACGACGTGGCCTTTCAAAACCTCGGCCTCGTGATTGTGGACGAACAGCACCGCTTCGGCGTGGCGCAGCGTCTCGCC
CTGAAAAACAAAGGCCGCGACGTCCACCAGCTCATGATGTCTGCCACCCCTATCCCGCGCACCCTCGCCATGAGCTTTTT
CGCCGACCTCGATGTGTCCTTGATCGACGAACTCCCGCCCGGCCGCACGCCCATCCAAACCCGCCTCGTCAACAGCCTGC
GCCGTGCCGAAGTCGAAGGCTATCTGCTGAACATCTGCCGCAAAGGGCAACAGGCATATTGGGTCTGCCCGCTGATCGAA
GAGAGCGAAACCCTCCAGCTGCAAACCGCCACCGAAACCCTGGAGCAGCTTCAGACGGCCTTGCCCGAACTCAACATCGG
CCTCGTACACGGCCGCATGAAAGCCGCCGAAAAAGCCGCTGTGATGGCCGAATTTGCCGCAGGCCGTCTGAACGTACTCG
TCGCCACCACCGTGATCGAGGTCGGCGTGGATGTGCCCAACGCCGCGCTGATGGTGATCGAACACGCCGAACGCATGGGC
CTGGCGCAACTGCACCAACTGCGCGGGCGCGTCGGGCGCGGCGCGGCCAAAAGCGTGTGCGTCCTTTTGTTTGCCGAGCC
GTTGAGCGAATTGGCCAAAGCACGGCTGAAAGTGATTTACGAGCACACCGACGGCTTTGAAATCGCCCGCCAAGACCTCA
ACATCCGCGGCCCCGGCGAATTTCTCGGCGCACGCCAAAGCGGCGTACCCATGCTGCGCTTTGCCAACTTGGAACAGGAT
TTGCACCTGTTGGAACACGCCCGCGAAATCGCCCCGCAACTGATCGAGCAGCATCCCGACATCGTCAAAGCCCATTTGGA
CAGATGGCTGGCCAGCCGCGCCGCCTACATGGGCGCGTAA

Domains

Predicted by InterproScan.

Helicase conserved C-terminal domain (Helicase_C)

(463-574)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(603-665)

DEAD/DEAH box helicase (DEAD)

(262-418)

RecG wedge domain (RecG_wedge)

(12-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

85.546

99.853

0.854

Multiple sequence alignment