Detailed information    

insolico Bioinformatically predicted

Overview

Name   recC   Type   Machinery gene
Locus tag   CGZ77_RS07810 Genome accession   NZ_CP022527
Coordinates   1574386..1577595 (-) Length   1069 a.a.
NCBI ID   WP_094031087.1    Uniprot ID   -
Organism   Neisseria sp. KEM232     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1569386..1582595
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGZ77_RS07790 (CGZ77_07795) hprK 1569802..1570764 (+) 963 WP_036495449.1 HPr(Ser) kinase/phosphatase -
  CGZ77_RS07795 (CGZ77_07800) rapZ 1570745..1571590 (+) 846 WP_009425062.1 RNase adapter RapZ -
  CGZ77_RS07800 (CGZ77_07805) ylqF 1571708..1572640 (+) 933 WP_009425061.1 ribosome biogenesis GTPase YlqF -
  CGZ77_RS07805 (CGZ77_07810) - 1572908..1574227 (-) 1320 WP_009425059.1 murein hydrolase activator EnvC -
  CGZ77_RS07810 (CGZ77_07815) recC 1574386..1577595 (-) 3210 WP_094031087.1 exodeoxyribonuclease V subunit gamma Machinery gene
  CGZ77_RS07815 (CGZ77_07820) - 1577812..1578114 (+) 303 WP_009425056.1 TM2 domain-containing protein -
  CGZ77_RS07820 (CGZ77_07825) - 1578191..1578865 (+) 675 WP_009425055.1 cytochrome b/b6 domain-containing protein -
  CGZ77_RS07825 (CGZ77_07830) - 1578958..1580049 (-) 1092 WP_009425054.1 hypothetical protein -
  CGZ77_RS07830 (CGZ77_07835) - 1580217..1581956 (+) 1740 WP_036495448.1 potassium/proton antiporter -

Sequence

Protein


Download         Length: 1069 a.a.        Molecular weight: 117949.86 Da        Isoelectric Point: 5.1507

>NTDB_id=240319 CGZ77_RS07810 WP_094031087.1 1574386..1577595(-) (recC) [Neisseria sp. KEM232]
MLNLYQSNRLEDLAAMMHKVQQSRPLPQALAAEEVMVQSQGMRRFVARYLAKQDGIAANIRFSLPAGFAWRLMRDLLPGI
PELSPFDTEVMRWRLLGLFVSDGLNAPELASAKQVLSGYLAGGETAAYRLAGQIADIFDQYLVYRPDWIDAWQRGKPIGL
GGDEAWQAELWRFLDDGRQSAPHRVEMRRRLSAALAAPPAGVLPDRLCVFGIATLAPMYLQLLQELAQHCEVHIFALNPS
AEYWGNIIEPAQMLQQNDADPAAAGHPLLASLGKQGRDFFNALADSELAADLSVYRDEALSDGLLHRLQYGLQTLALPDG
SARADDSIRIVAAHSPLRELQILKEHLLALLAEHPDWQPHDIAVLTPDIEPYAPFLEAVFGRESRQPLPYSVSDVKLGRR
RPLLAALEQLADIFDSRFEADKIFALLENETVLARFGLTLEDLPLLRDTAERLNIRWGADETMRGGGSALFTWQQGLDRI
ALGWMLPDNGSLWQGVSPWHADPSHTAVYARFAAFIGRLKHWHAIWQRPADIAGWAERIRSLAEDICEPSEADRAAAQQL
AQALARWQQEAALAGFIGELSGSIASLHLSNFLGSRSDAGFLRGGITFCGMVPMRSLPFKVLCLIGLDDGKFPRDTRAAA
FDLIARHPRKGDRARRDDDRYLFLEALISAREHLYLSYVGRDIRTNEALAPSALVGELADCLADMTGQSVEELNAALVEN
HPLQAFSTRYFDGGRLSSTRADYAAALSAPPAKPAPFCGTESENADGGAGISTEVGHAAFLDFWRNPVKHWLSHTLDWQA
PYLGGAWETAEPFEPPRPRDTAAAYLDARLNRRDFADTAQVLEARSLLPAGEIGTLWRERCETAAKSLDSDLIASPPLPA
APYTFVSDGLTLYGSLDSLHRDGRIRFLDHAPNAPEKTVLLLEHLIYNAVRPDSAADLCSHWVQPDQITTLPPIPQQQAR
TLLAAWLAWWRTGQSRPLPFFAKTTLAAAEALLPDGKKTEEERRLSAYKAAATAYFGGKKSTGQCDYAEVAQVFGRDDTP
PVDGELFWLLAENLAAPLLAALSDTKEAV

Nucleotide


Download         Length: 3210 bp        

>NTDB_id=240319 CGZ77_RS07810 WP_094031087.1 1574386..1577595(-) (recC) [Neisseria sp. KEM232]
ATGCTTAACCTCTACCAGTCCAACCGCCTCGAAGATTTGGCCGCCATGATGCACAAAGTGCAGCAGAGCCGCCCGCTGCC
GCAGGCGTTGGCGGCGGAGGAAGTGATGGTGCAGAGCCAGGGCATGCGCCGCTTTGTCGCCCGCTATCTGGCGAAGCAGG
ACGGCATCGCGGCCAACATCCGCTTCTCCCTGCCTGCCGGTTTCGCCTGGCGGCTGATGCGCGACCTGCTGCCCGGCATT
CCCGAACTGAGCCCCTTCGACACCGAAGTGATGCGCTGGCGGCTATTGGGTCTGTTTGTTTCAGACGGCCTCAATGCCCC
CGAGCTGGCGTCGGCCAAACAGGTGCTGTCGGGCTATCTTGCGGGCGGCGAAACGGCGGCCTACCGGCTTGCCGGGCAGA
TCGCCGACATTTTCGACCAATACCTTGTCTACCGTCCCGACTGGATAGACGCCTGGCAGCGCGGCAAACCGATCGGGCTG
GGCGGCGACGAAGCCTGGCAGGCCGAATTGTGGCGCTTTCTCGACGACGGCCGCCAAAGCGCGCCGCACCGCGTCGAAAT
GCGCCGCCGCCTGAGCGCCGCCCTTGCCGCGCCGCCCGCAGGCGTGCTGCCCGATCGCCTGTGCGTGTTCGGCATCGCCA
CCCTCGCGCCGATGTACCTGCAACTCTTACAGGAACTCGCACAACACTGCGAAGTGCACATCTTCGCCCTCAACCCCTCG
GCCGAATACTGGGGCAACATCATCGAACCGGCGCAGATGCTGCAACAGAACGATGCCGATCCCGCCGCCGCAGGCCACCC
CCTGCTCGCCTCGTTGGGCAAACAGGGGCGTGACTTTTTCAACGCCCTGGCCGACAGCGAATTGGCCGCCGACCTTTCCG
TCTACCGCGACGAAGCCCTTTCAGACGGCCTCCTGCACCGCCTGCAATACGGCCTGCAAACCCTCGCCCTGCCCGACGGA
AGCGCCCGCGCCGACGACAGCATCCGCATCGTTGCCGCCCACAGCCCCCTGCGCGAACTGCAAATCCTCAAAGAACACCT
GCTCGCCCTGCTGGCCGAACATCCCGACTGGCAGCCGCACGACATCGCCGTCCTCACCCCCGACATCGAACCCTACGCCC
CCTTCCTCGAAGCCGTGTTCGGCCGCGAAAGCCGACAGCCGCTGCCCTATTCCGTGTCCGACGTCAAACTCGGCCGCCGC
CGCCCGCTGCTGGCGGCGCTCGAACAGCTGGCCGACATCTTCGACAGCCGCTTCGAAGCCGACAAAATCTTCGCCCTCTT
GGAAAACGAAACCGTCCTCGCCCGCTTCGGCCTCACCCTCGAAGACCTGCCGCTGCTGCGCGACACCGCCGAACGCCTCA
ACATCCGCTGGGGCGCCGACGAAACCATGCGCGGTGGCGGCAGTGCCCTGTTCACCTGGCAGCAGGGGCTGGACAGAATC
GCCCTCGGCTGGATGCTGCCCGACAACGGCAGCCTGTGGCAGGGCGTCAGCCCGTGGCACGCCGACCCCAGCCACACCGC
CGTTTACGCCCGCTTCGCCGCCTTCATAGGCCGTCTGAAACACTGGCACGCCATCTGGCAGCGGCCCGCAGACATCGCAG
GATGGGCGGAGCGTATCCGCAGCCTTGCCGAAGACATATGCGAACCGTCCGAAGCAGACCGCGCCGCCGCCCAGCAGCTC
GCGCAGGCACTCGCCCGCTGGCAGCAGGAAGCCGCCCTCGCCGGCTTTATCGGCGAACTCTCCGGCAGCATTGCAAGCCT
GCACCTGTCGAATTTTCTCGGCAGCCGCAGCGACGCCGGCTTCCTGCGCGGCGGCATCACCTTCTGCGGCATGGTGCCCA
TGCGCTCCCTGCCCTTCAAAGTCCTGTGCCTCATCGGCCTCGACGACGGCAAATTCCCGCGCGATACCCGCGCCGCCGCC
TTCGACCTCATCGCCCGCCACCCGCGCAAAGGCGACCGCGCCCGCCGCGACGACGACCGCTACCTCTTCCTCGAAGCCCT
CATCAGCGCCCGCGAACACCTCTATCTCTCCTACGTCGGCCGCGACATCCGCACCAACGAAGCCCTCGCCCCCTCCGCCC
TCGTCGGCGAACTGGCCGACTGCCTCGCCGACATGACCGGGCAAAGCGTGGAAGAGTTAAACGCCGCCCTCGTCGAAAAC
CACCCCCTGCAAGCCTTCTCCACCCGCTACTTCGACGGCGGCAGACTCAGCTCTACCCGCGCCGACTACGCCGCCGCCCT
GTCCGCCCCGCCCGCCAAACCCGCCCCCTTCTGCGGCACTGAATCGGAAAACGCAGACGGCGGCGCCGGCATTTCCACCG
AAGTCGGCCACGCAGCCTTTCTCGACTTCTGGCGCAACCCCGTCAAACACTGGCTCTCGCACACACTCGACTGGCAGGCG
CCCTATCTCGGCGGCGCATGGGAAACCGCCGAACCCTTCGAGCCGCCGCGCCCGCGCGACACCGCCGCCGCCTACCTCGA
CGCCCGCCTCAACCGCCGCGACTTCGCCGACACCGCCCAAGTCCTCGAAGCCCGCTCCCTGCTGCCCGCAGGCGAAATCG
GCACACTCTGGCGCGAACGCTGCGAAACCGCCGCCAAATCCCTCGACTCCGACCTCATCGCCAGCCCGCCCCTACCAGCC
GCCCCCTACACCTTCGTTTCAGACGGCCTCACCCTCTACGGCAGCCTCGACAGCCTGCACCGCGACGGCCGCATCCGCTT
CCTCGACCACGCCCCCAACGCCCCCGAAAAAACCGTCCTCCTACTCGAACACCTCATCTACAACGCCGTGCGCCCCGACA
GCGCCGCCGACCTGTGCAGCCACTGGGTGCAGCCCGACCAAATCACCACTCTCCCCCCCATCCCGCAGCAACAGGCGCGC
ACCCTGCTTGCCGCCTGGCTCGCCTGGTGGCGCACCGGCCAAAGCCGCCCCCTGCCCTTCTTTGCCAAAACCACCCTCGC
CGCCGCCGAAGCCCTGTTGCCCGACGGCAAAAAAACAGAAGAAGAGCGGCGCCTGTCCGCCTACAAAGCCGCCGCCACCG
CCTACTTCGGCGGCAAAAAAAGCACCGGCCAGTGCGACTACGCCGAAGTCGCCCAAGTCTTCGGCCGCGACGATACTCCT
CCCGTCGACGGCGAACTCTTCTGGCTGCTGGCGGAAAACCTCGCCGCCCCCCTGCTCGCTGCCCTGTCCGACACCAAAGA
GGCCGTCTGA

Domains

Predicted by InterproScan.

Exodeoxyribonuclease V, gamma subunit (Exonuc_V_gamma)

(2-310)

RecC C-terminal domain (RecC_C)

(774-991)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recC Neisseria gonorrhoeae strain FA1090

55.214

100

0.555

Multiple sequence alignment