Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   C7M29_RS04705 Genome accession   NZ_CP028217
Coordinates   908333..909160 (-) Length   275 a.a.
NCBI ID   WP_024571363.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102751     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 903333..914160
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M29_RS04680 (C7M29_00924) abrB 905679..905969 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  C7M29_RS04685 (C7M29_00925) rsmI 906018..906896 (-) 879 WP_038428262.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  C7M29_RS04690 (C7M29_00926) yazA 906871..907170 (-) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  C7M29_RS04695 (C7M29_00927) trmNF 907157..907900 (-) 744 WP_161476524.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  C7M29_RS04700 (C7M29_00928) yabA 907959..908318 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  C7M29_RS04705 (C7M29_00929) yaaT 908333..909160 (-) 828 WP_024571363.1 competence/sporulation regulator complex protein RicT Regulator
  C7M29_RS04710 (C7M29_00930) holB 909163..910152 (-) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  C7M29_RS04715 (C7M29_00931) yaaR 910164..910604 (-) 441 WP_009966249.1 YaaR family protein -
  C7M29_RS04720 (C7M29_00932) darA 910617..910946 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  C7M29_RS04725 (C7M29_00933) tmk 911020..911658 (-) 639 WP_015715093.1 dTMP kinase -
  C7M29_RS04730 (C7M29_00934) efpO 911655..913097 (-) 1443 WP_161476525.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31242.10 Da        Isoelectric Point: 4.8445

>NTDB_id=240318 C7M29_RS04705 WP_024571363.1 908333..909160(-) (yaaT) [Bacillus subtilis strain SRCM102751]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKH
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=240318 C7M29_RS04705 WP_024571363.1 908333..909160(-) (yaaT) [Bacillus subtilis strain SRCM102751]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCAGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAC
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTCCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.273

100

0.993

Multiple sequence alignment