Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   CGU46_RS06690 Genome accession   NZ_CP022525
Coordinates   1410238..1410645 (-) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain Ocean-1175     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 1405238..1415645
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGU46_RS06670 (CGU46_06670) pilK 1406170..1407045 (-) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -
  CGU46_RS06675 (CGU46_06675) pilJ 1407106..1409154 (-) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  CGU46_RS06680 (CGU46_06680) - 1409239..1409775 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  CGU46_RS06685 (CGU46_06685) pilH 1409826..1410191 (-) 366 WP_003084587.1 twitching motility response regulator PilH -
  CGU46_RS06690 (CGU46_06690) pilG 1410238..1410645 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  CGU46_RS06695 (CGU46_06695) gshB 1410900..1411853 (+) 954 WP_003100943.1 glutathione synthase -
  CGU46_RS06700 (CGU46_06700) - 1412000..1412893 (+) 894 WP_009315060.1 energy transducer TonB -
  CGU46_RS06705 (CGU46_06705) - 1412942..1413511 (+) 570 WP_003084577.1 YqgE/AlgH family protein -
  CGU46_RS06710 (CGU46_06710) ruvX 1413511..1413945 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  CGU46_RS06715 (CGU46_06715) pyrR 1414057..1414569 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  CGU46_RS06720 (CGU46_06720) - 1414593..1415597 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=240241 CGU46_RS06690 WP_003084583.1 1410238..1410645(-) (pilG) [Pseudomonas aeruginosa strain Ocean-1175]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=240241 CGU46_RS06690 WP_003084583.1 1410238..1410645(-) (pilG) [Pseudomonas aeruginosa strain Ocean-1175]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment