Detailed information NTG0240240

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: C7M28_RS15555
• Genome accession: NZ_CP028215
• Coordinates: 2990131..2991258 (-)
• Length: 375 a.a.
• NCBI ID: WP_052728183.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM102750
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2985131..2996258

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M28_RS15535 (C7M28_03055)	-	2987093..2987695 (+)	603	WP_046380830.1	hypothetical protein	-
C7M28_RS15540 (C7M28_03056)	-	2987695..2989566 (+)	1872	WP_250620454.1	hypothetical protein	-
C7M28_RS21855	-	2989667..2989825 (-)	159	WP_121509446.1	YgjP-like metallopeptidase domain-containing protein	-
C7M28_RS15550 (C7M28_03057)	-	2989944..2990141 (-)	198	WP_003240078.1	hypothetical protein	-
C7M28_RS15555 (C7M28_03058)	rapC	2990131..2991258 (-)	1128	WP_052728183.1	tetratricopeptide repeat protein	Regulator
C7M28_RS15560 (C7M28_03059)	-	2991447..2991683 (-)	237	Protein_3033	hypothetical protein	-
C7M28_RS15565 (C7M28_03060)	-	2991833..2992225 (-)	393	WP_046380833.1	hypothetical protein	-
C7M28_RS15570 (C7M28_03061)	-	2992558..2993028 (-)	471	WP_046380834.1	antitoxin YezG family protein	-
C7M28_RS15575 (C7M28_03062)	yeeF	2993033..2995039 (-)	2007	WP_046380835.1	LXG family T7SS effector deoxyribonuclease toxin YeeF	-
C7M28_RS15580 (C7M28_03063)	-	2995206..2995544 (+)	339	WP_021481280.1	hypothetical protein	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 44492.19 Da
• Isoelectric Point: 6.6870

>NTDB_id=240240 C7M28_RS15555 WP_052728183.1 2990131..2991258(-) (rapC) [Bacillus subtilis strain SRCM102750]
MGTISSPHVGMKINEWNRHIQKFNVTDAEMLKAEIERDIDIMEEDQDLLIYYQLIAFRHQLMIDYVIPTEGNQMELSEYL
KRIEGSNRKMEKLVEYYYYFFQGMYEFKEGNFLSAITFYQKAENTIPYISDEIERAEFYFKMAEVFYHMKQTHVSMHYSS
QAYNIYKTHDLYSVRRIQCHFVIAGNYDDLESHEKALPHLEQALKGARLLESKNKRIYGQALFNIGNCYLKMGELTKAAK
YMEKSIFQFKKSNFNNLTQAYHDLALIYFLQHKQEQAMDCFRKGVRFACKFDDDLFKIMFEGLQTLFIKKGEASILLNVF
NKLETSQGYPYMEELALLAAKFYTEIGQMDDSVICFKKMVHARKQIQRGDCLYEI

Nucleotide

• Length: 1128 bp

>NTDB_id=240240 C7M28_RS15555 WP_052728183.1 2990131..2991258(-) (rapC) [Bacillus subtilis strain SRCM102750]
TTGGGCACGATTTCGTCTCCGCACGTTGGGATGAAAATTAATGAGTGGAACCGGCATATTCAAAAGTTTAATGTGACTGA
CGCTGAAATGCTTAAAGCTGAGATCGAACGGGACATTGACATCATGGAAGAAGACCAAGACCTCTTGATTTACTATCAGC
TCATTGCATTTCGCCATCAGCTTATGATTGACTATGTGATTCCTACTGAAGGAAACCAAATGGAGTTATCAGAATATTTA
AAGAGAATTGAAGGCAGCAACAGGAAGATGGAGAAGCTCGTTGAATACTACTATTACTTTTTTCAAGGAATGTATGAATT
CAAAGAGGGCAATTTCTTAAGTGCCATTACATTCTATCAAAAAGCGGAAAACACAATTCCCTATATTTCAGATGAAATTG
AGCGGGCGGAATTTTATTTTAAAATGGCTGAAGTGTTTTATCATATGAAACAAACCCACGTATCCATGCACTATTCTTCT
CAGGCGTATAACATCTATAAAACGCACGACCTTTACTCAGTCCGCCGCATACAATGCCATTTTGTAATAGCAGGTAATTA
CGACGATTTAGAAAGTCATGAAAAGGCGCTCCCTCACCTCGAACAGGCACTAAAAGGCGCACGGCTGCTTGAAAGCAAAA
ACAAGCGGATTTACGGCCAAGCTTTATTCAATATCGGAAATTGTTATCTTAAAATGGGAGAATTGACGAAAGCAGCAAAA
TACATGGAGAAATCGATATTCCAATTTAAAAAATCAAATTTCAACAACTTGACACAAGCTTACCACGATTTAGCCTTAAT
TTATTTTCTTCAACATAAACAAGAACAGGCAATGGATTGTTTCAGAAAAGGCGTACGCTTCGCATGTAAATTCGATGATG
ACCTATTTAAAATTATGTTTGAAGGATTGCAGACGCTGTTTATCAAAAAAGGAGAAGCGTCCATTTTATTAAATGTTTTC
AACAAATTAGAGACATCCCAAGGATATCCTTATATGGAAGAGTTGGCATTATTAGCCGCAAAGTTTTATACTGAAATTGG
GCAGATGGATGATTCTGTTATCTGTTTCAAAAAGATGGTTCATGCCCGCAAACAAATTCAGAGAGGGGATTGTTTGTATG
AAATTTAA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_8) (259-286)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (3-64)

• Tetratricopeptide repeat (TPR_12) (187-245)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	41.689	100	0.421
rapF	Bacillus subtilis subsp. subtilis str. 168	38.786	100	0.392