Detailed information NTG0240221

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: C7M28_RS13470
• Genome accession: NZ_CP028215
• Coordinates: 2560543..2561664 (+)
• Length: 373 a.a.
• NCBI ID: WP_046380767.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM102750
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2555543..2566664

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M28_RS13445 (C7M28_02645)	ycdA	2555548..2556612 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
C7M28_RS13450	-	2556635..2556766 (-)	132	WP_003246334.1	hypothetical protein	-
C7M28_RS13455 (C7M28_02646)	ycdB	2556940..2558361 (+)	1422	WP_046380765.1	YcdB/YcdC domain-containing protein	-
C7M28_RS13460 (C7M28_02647)	ycdC	2558548..2559909 (+)	1362	WP_046381483.1	YcdB/YcdC domain-containing protein	-
C7M28_RS13465 (C7M28_02648)	cwlK	2559917..2560420 (-)	504	WP_046380766.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
C7M28_RS13470 (C7M28_02649)	rapF	2560543..2561664 (+)	1122	WP_046380767.1	response regulator aspartate phosphatase RapJ	Regulator
C7M28_RS13475 (C7M28_02650)	ycdF	2561771..2562547 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
C7M28_RS13480 (C7M28_02651)	ycdG	2562572..2564257 (+)	1686	WP_003234736.1	alpha-glucosidase	-
C7M28_RS13485 (C7M28_02652)	znuA	2564445..2565404 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
C7M28_RS13490 (C7M28_02653)	znuC	2565460..2566155 (+)	696	WP_003234730.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44356.17 Da
• Isoelectric Point: 4.8344

>NTDB_id=240221 C7M28_RS13470 WP_046380767.1 2560543..2561664(+) (rapF) [Bacillus subtilis strain SRCM102750]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDSYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=240221 C7M28_RS13470 WP_046380767.1 2560543..2561664(+) (rapF) [Bacillus subtilis strain SRCM102750]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAATCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACTCGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGTTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405