Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C7M28_RS10870 Genome accession   NZ_CP028215
Coordinates   2091018..2091707 (-) Length   229 a.a.
NCBI ID   WP_046381459.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102750     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2086018..2096707
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M28_RS10850 (C7M28_02137) yxeA 2086923..2087270 (-) 348 WP_015715011.1 YxeA family protein -
  C7M28_RS10855 (C7M28_02138) yxdM 2087284..2089152 (-) 1869 WP_046381458.1 ABC transporter permease YxdM -
  C7M28_RS10860 (C7M28_02139) yxdL 2089127..2089900 (-) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  C7M28_RS10865 (C7M28_02140) yxdK 2090044..2091021 (-) 978 WP_024572300.1 two-component system sensor histidine kinase YxdK -
  C7M28_RS10870 (C7M28_02141) braR 2091018..2091707 (-) 690 WP_046381459.1 two-component system response regulator YxdJ Regulator
  C7M28_RS10875 (C7M28_02142) iolJ 2091815..2092687 (-) 873 WP_015250854.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  C7M28_RS10880 (C7M28_02143) iolI 2092708..2093544 (-) 837 WP_046381460.1 2-keto-myo-inositol isomerase -
  C7M28_RS10885 (C7M28_02144) iolH 2093630..2094499 (-) 870 WP_015250852.1 sugar phosphate isomerase/epimerase -
  C7M28_RS10890 (C7M28_02145) iolG 2094519..2095553 (-) 1035 WP_003244482.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26627.41 Da        Isoelectric Point: 4.9648

>NTDB_id=240204 C7M28_RS10870 WP_046381459.1 2091018..2091707(-) (braR) [Bacillus subtilis strain SRCM102750]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFKAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=240204 C7M28_RS10870 WP_046381459.1 2091018..2091707(-) (braR) [Bacillus subtilis strain SRCM102750]
TTGAATAAAATTATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTAAAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAACGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTGGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTCCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406

Multiple sequence alignment