Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   C7M28_RS00585 Genome accession   NZ_CP028215
Coordinates   100119..100736 (-) Length   205 a.a.
NCBI ID   WP_003238209.1    Uniprot ID   G4NVV3
Organism   Bacillus subtilis strain SRCM102750     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 95119..105736
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M28_RS00560 (C7M28_00118) yndJ 95440..97080 (+) 1641 WP_003231612.1 YndJ family protein -
  C7M28_RS00565 (C7M28_00119) - 97168..97482 (+) 315 WP_003245621.1 hypothetical protein -
  C7M28_RS00570 (C7M28_00120) pghL 97708..98466 (+) 759 WP_003245793.1 gamma-polyglutamate hydrolase PghL -
  C7M28_RS00575 (C7M28_00121) - 98493..98942 (-) 450 WP_003245454.1 YndM family protein -
  C7M28_RS00580 (C7M28_00122) fosB 99150..99569 (+) 420 WP_046381053.1 metallothiol transferase FosB -
  C7M28_RS21595 - 99493..99832 (+) 340 Protein_121 hypothetical protein -
  C7M28_RS00585 (C7M28_00123) dinR/lexA 100119..100736 (-) 618 WP_003238209.1 transcriptional repressor LexA Regulator
  C7M28_RS00590 (C7M28_00124) yneA 100886..101203 (+) 318 WP_003231598.1 cell division suppressor protein YneA -
  C7M28_RS00595 (C7M28_00125) dinL 101222..101875 (+) 654 WP_014479938.1 recombinase family protein -
  C7M28_RS00600 (C7M28_00126) ynzC 101939..102172 (+) 234 WP_003231595.1 DUF896 domain-containing protein -
  C7M28_RS00605 (C7M28_00127) recP/tkt 102341..104344 (+) 2004 WP_014476936.1 transketolase Machinery gene
  C7M28_RS00610 (C7M28_00128) sirA 104497..104943 (+) 447 WP_003231591.1 sporulation inhibitor of replication protein SirA -
  C7M28_RS00615 (C7M28_00129) yneF 105029..105247 (+) 219 WP_003221221.1 YneF family protein -
  C7M28_RS00620 (C7M28_00130) ynzD 105321..105494 (-) 174 WP_010886518.1 aspartyl-phosphate phosphatase YnzD -

Sequence

Protein


Download         Length: 205 a.a.        Molecular weight: 22849.36 Da        Isoelectric Point: 5.1450

>NTDB_id=240138 C7M28_RS00585 WP_003238209.1 100119..100736(-) (dinR/lexA) [Bacillus subtilis strain SRCM102750]
MTKLSKRQLDILRFIKAEVKSKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDEEVDIPQSQV
VNVPVIGKVTAGSPITAVENIEEYFPLPDRMVPPDEHVFMLEIMGDSMIDAGILDKDYVIVKQQNTANNGEIVVAMTEDD
EATVKRFYKEDTHIRLQPENPTMEPIILQNVSILGKVIGVFRTVH

Nucleotide


Download         Length: 618 bp        

>NTDB_id=240138 C7M28_RS00585 WP_003238209.1 100119..100736(-) (dinR/lexA) [Bacillus subtilis strain SRCM102750]
ATGACGAAGCTATCAAAAAGGCAACTTGATATCCTCCGTTTTATTAAAGCAGAGGTTAAATCAAAAGGATATCCGCCTTC
CGTGAGAGAGATCGGAGAGGCTGTCGGGCTTGCGTCCAGCTCTACTGTCCACGGCCATTTGGCCCGCTTGGAAACAAAAG
GGCTGATCAGACGAGATCCGACAAAACCAAGAGCAATAGAAATTCTTGATGAAGAAGTAGACATTCCGCAAAGCCAGGTC
GTTAATGTACCGGTCATCGGGAAAGTCACGGCGGGATCTCCTATTACAGCAGTAGAAAATATTGAAGAATATTTTCCGCT
CCCAGACCGCATGGTTCCTCCAGACGAGCATGTATTTATGCTGGAGATTATGGGAGACAGTATGATAGATGCTGGTATTC
TCGATAAGGACTATGTCATCGTTAAACAGCAAAACACAGCGAACAATGGGGAAATTGTAGTTGCAATGACAGAAGATGAT
GAAGCAACTGTAAAACGATTCTATAAAGAGGATACCCACATTCGCTTGCAGCCTGAGAACCCAACGATGGAACCTATCAT
TTTGCAGAATGTCAGCATTCTAGGGAAAGTGATTGGCGTGTTCAGAACCGTCCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(84-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

100

100

1