Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C7M27_RS19835 Genome accession   NZ_CP028213
Coordinates   3817192..3817881 (+) Length   229 a.a.
NCBI ID   WP_128740862.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102749     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3812192..3822881
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M27_RS19815 (C7M27_03917) iolG 3813346..3814380 (+) 1035 WP_003244482.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -
  C7M27_RS19820 (C7M27_03918) iolH 3814400..3815269 (+) 870 WP_015250852.1 sugar phosphate isomerase/epimerase -
  C7M27_RS19825 (C7M27_03919) iolI 3815355..3816191 (+) 837 WP_049140862.1 2-keto-myo-inositol isomerase -
  C7M27_RS19830 (C7M27_03920) iolJ 3816212..3817084 (+) 873 WP_064671730.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  C7M27_RS19835 (C7M27_03921) braR 3817192..3817881 (+) 690 WP_128740862.1 two-component system response regulator YxdJ Regulator
  C7M27_RS19840 (C7M27_03922) yxdK 3817878..3818855 (+) 978 WP_021481026.1 two-component system sensor histidine kinase YxdK -
  C7M27_RS19845 (C7M27_03923) yxdL 3818999..3819772 (+) 774 WP_014115765.1 ABC transporter ATP-binding protein YxdL -
  C7M27_RS19850 (C7M27_03924) yxdM 3819747..3821615 (+) 1869 WP_128740861.1 ABC transporter permease YxdM -
  C7M27_RS19855 (C7M27_03925) yxeA 3821629..3821976 (+) 348 WP_021481023.1 YxeA family protein -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26610.38 Da        Isoelectric Point: 4.8564

>NTDB_id=240128 C7M27_RS19835 WP_128740862.1 3817192..3817881(+) (braR) [Bacillus subtilis strain SRCM102749]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQP

Nucleotide


Download         Length: 690 bp        

>NTDB_id=240128 C7M27_RS19835 WP_128740862.1 3817192..3817881(+) (braR) [Bacillus subtilis strain SRCM102749]
GTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCTGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGCCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406