Detailed information NTG0240112

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: C7M27_RS17565
• Genome accession: NZ_CP028213
• Coordinates: 3398126..3399247 (-)
• Length: 373 a.a.
• NCBI ID: WP_064672038.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM102749
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3393126..3404247

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7M27_RS17545 (C7M27_03468)	znuC	3393635..3394330 (-)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-
C7M27_RS17550 (C7M27_03469)	znuA	3394385..3395344 (-)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
C7M27_RS17555 (C7M27_03470)	ycdG	3395532..3397217 (-)	1686	WP_064672037.1	alpha-glucosidase	-
C7M27_RS17560 (C7M27_03471)	ycdF	3397242..3398018 (-)	777	WP_003234739.1	SDR family oxidoreductase	-
C7M27_RS17565 (C7M27_03472)	rapF	3398126..3399247 (-)	1122	WP_064672038.1	response regulator aspartate phosphatase RapJ	Regulator
C7M27_RS17570 (C7M27_03473)	cwlK	3399370..3399873 (+)	504	WP_064672039.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
C7M27_RS17575 (C7M27_03474)	ycdC	3399881..3401242 (-)	1362	WP_064672084.1	YcdB/YcdC domain-containing protein	-
C7M27_RS17580 (C7M27_03475)	ycdB	3401429..3402850 (-)	1422	WP_064672040.1	YcdB/YcdC domain-containing protein	-
C7M27_RS17585	-	3403024..3403176 (+)	153	WP_021481864.1	hypothetical protein	-
C7M27_RS17590 (C7M27_03476)	ycdA	3403177..3404241 (+)	1065	WP_003234750.1	DUF4352 domain-containing protein	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44443.31 Da
• Isoelectric Point: 4.8344

>NTDB_id=240112 C7M27_RS17565 WP_064672038.1 3398126..3399247(-) (rapF) [Bacillus subtilis strain SRCM102749]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSASEWEDDMYLTKFRLIHELYLGNGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=240112 C7M27_RS17565 WP_064672038.1 3398126..3399247(-) (rapF) [Bacillus subtilis strain SRCM102749]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATATTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTATACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAAGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGTCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAACGGTGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCAGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405